Literature DB >> 16900144

How does DNA sequence motif discovery work?

Patrik D'haeseleer1.   

Abstract

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Year:  2006        PMID： 16900144     DOI： 10.1038/nbt0806-959

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN： 1087-0156            Impact factor:   54.908


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  36 in total

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Journal:  Chem Rev       Date:  2007-07-18       Impact factor: 60.622

2.  Characterization and identification of cis-regulatory elements in Arabidopsis based on single-nucleotide polymorphism information.

Authors:  Paula Korkuc; Jos H M Schippers; Dirk Walther
Journal:  Plant Physiol       Date:  2013-11-07       Impact factor: 8.340

Review 3.  Mechanisms and evolution of control logic in prokaryotic transcriptional regulation.

Authors:  Sacha A F T van Hijum; Marnix H Medema; Oscar P Kuipers
Journal:  Microbiol Mol Biol Rev       Date:  2009-09       Impact factor: 11.056

4.  Characterization of protein-DNA interactions using protein microarrays.

Authors:  Shaohui Hu; Zhi Xie; Seth Blackshaw; Jiang Qian; Heng Zhu
Journal:  Cold Spring Harb Protoc       Date:  2011-05-01

5.  Evolutionary Dynamics of GLD-1-mRNA complexes in Caenorhabditis nematodes.

Authors:  Alana V Beadell; Eric S Haag
Journal:  Genome Biol Evol       Date:  2014-12-09       Impact factor: 3.416

6.  RegPredict: an integrated system for regulon inference in prokaryotes by comparative genomics approach.

Authors:  Pavel S Novichkov; Dmitry A Rodionov; Elena D Stavrovskaya; Elena S Novichkova; Alexey E Kazakov; Mikhail S Gelfand; Adam P Arkin; Andrey A Mironov; Inna Dubchak
Journal:  Nucleic Acids Res       Date:  2010-06-11       Impact factor: 16.971

Review 7.  Transcriptional regulatory circuits: predicting numbers from alphabets.

Authors:  Harold D Kim; Tal Shay; Erin K O'Shea; Aviv Regev
Journal:  Science       Date:  2009-07-24       Impact factor: 47.728

8.  Four histone variants mark the boundaries of polycistronic transcription units in Trypanosoma brucei.

Authors:  T Nicolai Siegel; Doeke R Hekstra; Louise E Kemp; Luisa M Figueiredo; Joanna E Lowell; David Fenyo; Xuning Wang; Scott Dewell; George A M Cross
Journal:  Genes Dev       Date:  2009-04-15       Impact factor: 11.361

9.  ssHMM: extracting intuitive sequence-structure motifs from high-throughput RNA-binding protein data.

Authors:  David Heller; Ralf Krestel; Uwe Ohler; Martin Vingron; Annalisa Marsico
Journal:  Nucleic Acids Res       Date:  2017-11-02       Impact factor: 16.971

10.  Genome-scale identification of cell-wall related genes in Arabidopsis based on co-expression network analysis.

Authors:  Shan Wang; Yanbin Yin; Qin Ma; Xiaojia Tang; Dongyun Hao; Ying Xu
Journal:  BMC Plant Biol       Date:  2012-08-09       Impact factor: 4.215
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