Literature DB >> 16899590

Statistical analysis of DNA microarray data in cancer research.

Jianqing Fan1, Yi Ren.   

Abstract

Microarray techniques have been widely used to monitor gene expression in many areas of biomedical research. They have been widely used for tumor diagnosis and classification, prediction of prognoses and treatment, and understanding of molecular mechanisms, biochemical pathways, and gene networks. Statistical methods are vital for these scientific endeavors. This article reviews recent developments of statistical methods for analyzing data from microarray experiments. Emphasis has been given to normalization of expression from multiple arrays, selecting significantly differentially expressed genes, tumor classifications, and gene expression pathways and networks.

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Year:  2006        PMID: 16899590     DOI: 10.1158/1078-0432.CCR-06-1033

Source DB:  PubMed          Journal:  Clin Cancer Res        ISSN: 1078-0432            Impact factor:   12.531


  14 in total

1.  NONPARAMETRIC ESTIMATION OF GENEWISE VARIANCE FOR MICROARRAY DATA.

Authors:  Jianqing Fan; Yang Feng; Yue S Niu
Journal:  Ann Stat       Date:  2010-11-01       Impact factor: 4.028

2.  High Dimensional Classification Using Features Annealed Independence Rules.

Authors:  Jianqing Fan; Yingying Fan
Journal:  Ann Stat       Date:  2008       Impact factor: 4.028

3.  A computational approach to the functional clustering of periodic gene-expression profiles.

Authors:  Bong-Rae Kim; Li Zhang; Arthur Berg; Jianqing Fan; Rongling Wu
Journal:  Genetics       Date:  2008-09-09       Impact factor: 4.562

4.  A Selective Overview of Variable Selection in High Dimensional Feature Space.

Authors:  Jianqing Fan; Jinchi Lv
Journal:  Stat Sin       Date:  2010-01       Impact factor: 1.261

5.  Ultrahigh dimensional feature selection: beyond the linear model.

Authors:  Jianqing Fan; Richard Samworth; Yichao Wu
Journal:  J Mach Learn Res       Date:  2009       Impact factor: 3.654

6.  Sparse High Dimensional Models in Economics.

Authors:  Jianqing Fan; Jinchi Lv; Lei Qi
Journal:  Annu Rev Econom       Date:  2011-09

7.  SWISS MADE: Standardized WithIn Class Sum of Squares to evaluate methodologies and dataset elements.

Authors:  Christopher R Cabanski; Yuan Qi; Xiaoying Yin; Eric Bair; Michele C Hayward; Cheng Fan; Jianying Li; Matthew D Wilkerson; J S Marron; Charles M Perou; D Neil Hayes
Journal:  PLoS One       Date:  2010-03-26       Impact factor: 3.240

8.  Identifying Biomarkers and Drug Targets Using Systems Biology Approaches for Pancreatic Cancer.

Authors:  Yi Tan; Lucio Miele; Fazlul H Sarkar; Zhiwei Wang
Journal:  Pancreat Disord Ther       Date:  2012-12-06

9.  A selective overview of feature screening for ultrahigh-dimensional data.

Authors:  Liu JingYuan; Zhong Wei; L I RunZe
Journal:  Sci China Math       Date:  2015-08-22       Impact factor: 1.331

10.  Clustering of time-course gene expression profiles using normal mixture models with autoregressive random effects.

Authors:  Kui Wang; Shu Kay Ng; Geoffrey J McLachlan
Journal:  BMC Bioinformatics       Date:  2012-11-14       Impact factor: 3.169

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