Literature DB >> 16898764

Aqueous solvation free energies of ions and ion-water clusters based on an accurate value for the absolute aqueous solvation free energy of the proton.

Casey P Kelly1, Christopher J Cramer, Donald G Truhlar.   

Abstract

Thermochemical cycles that involve pKa, gas-phase acidities, aqueous solvation free energies of neutral species, and gas-phase clustering free energies have been used with the cluster pair approximation to determine the absolute aqueous solvation free energy of the proton. The best value obtained in this work is in good agreement with the value reported by Tissandier et al. (Tissandier, M. D.; Cowen, K. A.; Feng, W. Y.; Gundlach, E.; Cohen, M. J.; Earhart, A. D.; Coe, J. V. J. Phys. Chem. A 1998, 102, 7787), who applied the cluster pair approximation to a less diverse and smaller data set of ions. We agree with previous workers who advocated the value of -265.9 kcal/mol for the absolute aqueous solvation free energy of the proton. Considering the uncertainties associated with the experimental gas-phase free energies of ions that are required to use the cluster pair approximation as well as analyses of various subsets of data, we estimate an uncertainty for the absolute aqueous solvation free energy of the proton of no less than 2 kcal/mol. Using a value of -265.9 kcal/mol for the absolute aqueous solvation free energy of the proton, we expand and update our previous compilation of absolute aqueous solvation free energies; this new data set contains conventional and absolute aqueous solvation free energies for 121 unclustered ions (not including the proton) and 147 conventional and absolute aqueous solvation free energies for 51 clustered ions containing from 1 to 6 water molecules. When tested against the same set of ions that was recently used to develop the SM6 continuum solvation model, SM6 retains its previously determined high accuracy; indeed, in most cases the mean unsigned error improves when it is tested against the more accurate reference data.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16898764     DOI: 10.1021/jp063552y

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  80 in total

1.  β-Nitro-5,10,15-tritolylcorroles.

Authors:  Manuela Stefanelli; Giuseppe Pomarico; Luca Tortora; Sara Nardis; Frank R Fronczek; Gregory T McCandless; Kevin M Smith; Machima Manowong; Yuanyuan Fang; Ping Chen; Karl M Kadish; Angela Rosa; Giampaolo Ricciardi; Roberto Paolesse
Journal:  Inorg Chem       Date:  2012-06-05       Impact factor: 5.165

Review 2.  Polarizable atomic multipole solutes in a Poisson-Boltzmann continuum.

Authors:  Michael J Schnieders; Nathan A Baker; Pengyu Ren; Jay W Ponder
Journal:  J Chem Phys       Date:  2007-03-28       Impact factor: 3.488

3.  First-principles calculation of pKa for cocaine, nicotine, neurotransmitters, and anilines in aqueous solution.

Authors:  Haiting Lu; Xi Chen; Chang-Guo Zhan
Journal:  J Phys Chem B       Date:  2007-08-11       Impact factor: 2.991

4.  How accurate are continuum solvation models for drug-like molecules?

Authors:  Jacob Kongsted; Pär Söderhjelm; Ulf Ryde
Journal:  J Comput Aided Mol Des       Date:  2009-05-15       Impact factor: 3.686

5.  Ab initio molecular dynamics calculations of ion hydration free energies.

Authors:  Kevin Leung; Susan B Rempe; O Anatole von Lilienfeld
Journal:  J Chem Phys       Date:  2009-05-28       Impact factor: 3.488

6.  Calculating solution redox free energies with ab initio quantum mechanical/molecular mechanical minimum free energy path method.

Authors:  Xiancheng Zeng; Hao Hu; Xiangqian Hu; Weitao Yang
Journal:  J Chem Phys       Date:  2009-04-28       Impact factor: 3.488

7.  Novel 8-nitroquinolin-2(1H)-ones as NTR-bioactivated antikinetoplastid molecules: Synthesis, electrochemical and SAR study.

Authors:  Julien Pedron; Clotilde Boudot; Sébastien Hutter; Sandra Bourgeade-Delmas; Jean-Luc Stigliani; Alix Sournia-Saquet; Alain Moreau; Elisa Boutet-Robinet; Lucie Paloque; Emmanuelle Mothes; Michèle Laget; Laure Vendier; Geneviève Pratviel; Susan Wyllie; Alan Fairlamb; Nadine Azas; Bertrand Courtioux; Alexis Valentin; Pierre Verhaeghe
Journal:  Eur J Med Chem       Date:  2018-06-05       Impact factor: 6.514

8.  Validation of density functional modeling protocols on experimental bis(mu-oxo)/mu-eta2:eta2-peroxo dicopper equilibria.

Authors:  John L Lewin; David E Heppner; Christopher J Cramer
Journal:  J Biol Inorg Chem       Date:  2007-08-21       Impact factor: 3.358

9.  Structural characterization of the P1+ intermediate state of the P-cluster of nitrogenase.

Authors:  Stephen M Keable; Oleg A Zadvornyy; Lewis E Johnson; Bojana Ginovska; Andrew J Rasmussen; Karamatullah Danyal; Brian J Eilers; Gregory A Prussia; Axl X LeVan; Simone Raugei; Lance C Seefeldt; John W Peters
Journal:  J Biol Chem       Date:  2018-05-02       Impact factor: 5.157

10.  Directly relating gas-phase cluster measurements to solution-phase hydrolysis, the absolute standard hydrogen electrode potential, and the absolute proton solvation energy.

Authors:  William A Donald; Ryan D Leib; Jeremy T O'Brien; Evan R Williams
Journal:  Chemistry       Date:  2009-06-08       Impact factor: 5.236

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.