Literature DB >> 16897448

5S rDNA variation and its phylogenetic inference in the genus Leporinus (Characiformes: Anostomidae).

Irani A Ferreira1, Claudio Oliveira, Paulo C Venere, Pedro M Galetti, Cesar Martins.   

Abstract

5S rDNA sequences have proven to be valuable as genetic markers to distinguish closely related species and also in the understanding of the dynamic of repetitive sequences in the genomes. In the aim to contribute to the knowledge of the evolutionary history of Leporinus (Anostomidae) and also to contribute to the understanding of the 5S rDNA sequences organization in the fish genome, analyses of 5S rDNA sequences were conducted in seven species of this genus. The 5S rRNA gene sequence was highly conserved among Leporinus species, whereas NTS exhibit high levels of variations related to insertions, deletions, microrepeats, and base substitutions. The phylogenetic analysis of the 5S rDNA sequences clustered the species into two clades that are in agreement with cytogenetic and morphological data.

Mesh:

Substances:

Year:  2006        PMID: 16897448     DOI: 10.1007/s10709-006-0005-6

Source DB:  PubMed          Journal:  Genetica        ISSN: 0016-6707            Impact factor:   1.082


  11 in total

1.  Nucleotide variation and physical mapping of ribosomal genes using FISH in genus Tor (Pisces, Cyprinidae).

Authors:  Indra Mani; Ravindra Kumar; Mamta Singh; N S Nagpure; B Kushwaha; P K Srivastava; D S Krishna Rao; W S Lakra
Journal:  Mol Biol Rep       Date:  2010-11-23       Impact factor: 2.316

2.  Molecular organization of 5S rDNA in bitterlings (Cyprinidae).

Authors:  Mika Fujiwara; Junya Inafuku; Akiko Takeda; Akiko Watanabe; Atushi Fujiwara; Sei-Ichi Kohno; Souichirou Kubota
Journal:  Genetica       Date:  2008-07-23       Impact factor: 1.082

3.  Evidence of birth-and-death evolution of 5S rRNA gene in Channa species (Teleostei, Perciformes).

Authors:  Anindya Sundar Barman; Mamta Singh; Rajeev Kumar Singh; Kuldeep Kumar Lal
Journal:  Genetica       Date:  2016-11-12       Impact factor: 1.082

4.  Chromosome mapping of retrotransposable elements Rex1 and Rex3 in Leporinus Spix, 1829 species (Characiformes: Anostomidae) and its relationships among heterochromatic segments and W sex chromosome.

Authors:  Rafael Splendore de Borba; Edson Lourenço da Silva; Patrícia Pasquali Parise-Maltempi
Journal:  Mob Genet Elements       Date:  2013-12-10

5.  Variation in the Karyotype, Cytochrome b Gene, and 5S rDNA of Four Thunnus (Perciformes, Scombridae) Tunas.

Authors:  Yan-Horn Lee; Tsair-Bor Yen; Chiu-Fen Chen; Mei-Chen Tseng
Journal:  Zool Stud       Date:  2018-07-10       Impact factor: 2.058

6.  Molecular organization and chromosomal localization of 5S rDNA in Amazonian Engystomops (Anura, Leiuperidae).

Authors:  Débora Silva Rodrigues; Miryan Rivera; Luciana Bolsoni Lourenço
Journal:  BMC Genet       Date:  2012-03-20       Impact factor: 2.797

7.  The 5S rDNA family evolves through concerted and birth-and-death evolution in fish genomes: an example from freshwater stingrays.

Authors:  Danillo Pinhal; Tatiana S Yoshimura; Carlos S Araki; Cesar Martins
Journal:  BMC Evol Biol       Date:  2011-05-31       Impact factor: 3.260

8.  Molecular organization and phylogenetic analysis of 5S rDNA in crustaceans of the genus Pollicipes reveal birth-and-death evolution and strong purifying selection.

Authors:  Alejandra Perina; David Seoane; Ana M González-Tizón; Fernanda Rodríguez-Fariña; Andrés Martínez-Lage
Journal:  BMC Evol Biol       Date:  2011-10-17       Impact factor: 3.260

9.  Comparative analysis of sex chromosomes in Leporinus species (Teleostei, Characiformes) using chromosome painting.

Authors:  Patrícia Pasquali Parise-Maltempi; Edson Lourenço da Silva; Willem Rens; Frances Dearden; Patricia C M O'Brien; Vladimir Trifonov; Malcolm A Ferguson-Smith
Journal:  BMC Genet       Date:  2013-07-03       Impact factor: 2.797

10.  A new type of homodiploid fish derived from the interspecific hybridization of female common carp × male blunt snout bream.

Authors:  Shi Wang; Xiaolan Ye; Yude Wang; Yuting Chen; Bowen Lin; Zhenfeng Yi; Zhuangwen Mao; Fangzhou Hu; Rurong Zhao; Juan Wang; Rong Zhou; Li Ren; Zhanzhou Yao; Min Tao; Chun Zhang; Jun Xiao; Qinbo Qin; Shaojun Liu
Journal:  Sci Rep       Date:  2017-06-23       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.