Literature DB >> 16897310

Structural and functional responses of a sewage microbial community to dilution-induced reductions in diversity.

Rima B Franklin1, Aaron L Mills.   

Abstract

The relationship between functional redundancy and microbial community structure-diversity was examined using laboratory incubations to ensure constant environmental conditions. Serial dilutions of a sewage microbial community were prepared, used to inoculate sterile sewage, and maintained in batch culture. Probability suggests that dilution of the initial community should remove rare organism types, creating mixtures of cells differing in diversity. Regrowth of the diluted mixtures generated communities similar in abundance but differing in community structure and relative diversity (as determined using two DNA fingerprinting techniques and dilution-to-extinction analysis of community-level physiological profiles). The in situ function of each regrown community was examined by monitoring the short-term uptake of five different (14)C-labeled compounds (glucose, acetate, citrate, palmitic acid, and an amino acid mixture). No significant differences were detected between treatments in either the rate of uptake of a substrate or the efficiency with which each community assimilated each compound. The fact that the activity of the original community was the same as that of a community regrown from an inoculum containing fewer that 100 cells (10(-6) dilution) indicates that functional redundancy was quite high in this system. For each organism type eliminated during the dilution process, at least one of the remaining types was able to provide the same function at the same level as the lost one. Further research is necessary to determine what impact this functional redundancy may have on overall ecosystem function and stability.

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Year:  2006        PMID: 16897310     DOI: 10.1007/s00248-006-9033-0

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  16 in total

1.  Impact of dilution on microbial community structure and functional potential: comparison of numerical simulations and batch culture experiments.

Authors:  R B Franklin; J L Garland; C H Bolster; A L Mills
Journal:  Appl Environ Microbiol       Date:  2001-02       Impact factor: 4.792

2.  How stable is stable? Function versus community composition.

Authors:  A Fernández; S Huang; S Seston; J Xing; R Hickey; C Criddle; J Tiedje
Journal:  Appl Environ Microbiol       Date:  1999-08       Impact factor: 4.792

3.  Assessment of microbial diversity in four southwestern United States soils by 16S rRNA gene terminal restriction fragment analysis.

Authors:  J Dunbar; L O Ticknor; C R Kuske
Journal:  Appl Environ Microbiol       Date:  2000-07       Impact factor: 4.792

4.  Prokaryotic diversity--magnitude, dynamics, and controlling factors.

Authors:  Vigdis Torsvik; Lise Øvreås; Tron Frede Thingstad
Journal:  Science       Date:  2002-05-10       Impact factor: 47.728

5.  ON THE RELATIVE ABUNDANCE OF BIRD SPECIES.

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Journal:  Proc Natl Acad Sci U S A       Date:  1957-03-15       Impact factor: 11.205

6.  Effects of microbial community diversity on the survival of Pseudomonas aeruginosa in the wheat rhizosphere.

Authors:  A Matos; L Kerkhof; J L Garland
Journal:  Microb Ecol       Date:  2005-06-17       Impact factor: 4.552

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Authors:  R M Atlas; A Horowitz; M Krichevsky; A K Bej
Journal:  Microb Ecol       Date:  1991-12       Impact factor: 4.552

8.  Use of nuclepore filters for counting bacteria by fluorescence microscopy.

Authors:  J E Hobbie; R J Daley; S Jasper
Journal:  Appl Environ Microbiol       Date:  1977-05       Impact factor: 4.792

9.  Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA.

Authors:  W T Liu; T L Marsh; H Cheng; L J Forney
Journal:  Appl Environ Microbiol       Date:  1997-11       Impact factor: 4.792

10.  The detection of disease clustering and a generalized regression approach.

Authors:  N Mantel
Journal:  Cancer Res       Date:  1967-02       Impact factor: 12.701

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  16 in total

1.  Microbial diversity determines the invasion of soil by a bacterial pathogen.

Authors:  Jan Dirk van Elsas; Mario Chiurazzi; Cyrus A Mallon; Dana Elhottova; Václav Kristufek; Joana Falcão Salles
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-09       Impact factor: 11.205

2.  Diversity of bacterial communities in container habitats of mosquitoes.

Authors:  Loganathan Ponnusamy; Ning Xu; Gil Stav; Dawn M Wesson; Coby Schal; Charles S Apperson
Journal:  Microb Ecol       Date:  2008-03-29       Impact factor: 4.552

3.  Diversity and population structure of sewage-derived microorganisms in wastewater treatment plant influent.

Authors:  S L McLellan; S M Huse; S R Mueller-Spitz; E N Andreishcheva; M L Sogin
Journal:  Environ Microbiol       Date:  2009-10-16       Impact factor: 5.491

4.  Revisiting the dilution procedure used to manipulate microbial biodiversity in terrestrial systems.

Authors:  Yan Yan; Eiko E Kuramae; Peter G L Klinkhamer; Johannes A van Veen
Journal:  Appl Environ Microbiol       Date:  2015-04-17       Impact factor: 4.792

5.  Predator richness increases the effect of prey diversity on prey yield.

Authors:  Muhammad Saleem; Ingo Fetzer; Carsten F Dormann; Hauke Harms; Antonis Chatzinotas
Journal:  Nat Commun       Date:  2012       Impact factor: 14.919

6.  Functional traits dominate the diversity-related selection of bacterial communities in the rhizosphere.

Authors:  Yan Yan; Eiko E Kuramae; Mattias de Hollander; Peter G L Klinkhamer; Johannes A van Veen
Journal:  ISME J       Date:  2016-08-02       Impact factor: 10.302

7.  Anthropogenic disturbances influencing ciliate functional feeding groups in impacted tropical streams.

Authors:  Bianca Trevizan Segovia; Fernando Miranda Lansac-Toha; Bianca Ramos de Meira; Adalgisa Fernanda Cabral; Fabio Amodêo Lansac-Tôha; Luiz Felipe Machado Velho
Journal:  Environ Sci Pollut Res Int       Date:  2016-07-20       Impact factor: 4.223

8.  Microbial composition affects the functioning of estuarine sediments.

Authors:  Heather E Reed; Jennifer B H Martiny
Journal:  ISME J       Date:  2012-12-13       Impact factor: 10.302

9.  The social structure of microbial community involved in colonization resistance.

Authors:  Xuesong He; Jeffrey S McLean; Lihong Guo; Renate Lux; Wenyuan Shi
Journal:  ISME J       Date:  2013-10-03       Impact factor: 10.302

Review 10.  Directed Evolution of Microbial Communities.

Authors:  Álvaro Sánchez; Jean C C Vila; Chang-Yu Chang; Juan Diaz-Colunga; Sylvie Estrela; María Rebolleda-Gomez
Journal:  Annu Rev Biophys       Date:  2021-03-01       Impact factor: 12.981

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