Literature DB >> 16888622

SAGA binds TBP via its Spt8 subunit in competition with DNA: implications for TBP recruitment.

Decha Sermwittayawong1, Song Tan.   

Abstract

In yeast, the multisubunit SAGA (Spt-Ada-Gcn5-acetyltransferase) complex acts as a coactivator to recruit the TATA-binding protein (TBP) to the TATA box, a critical step in eukaryotic gene regulation. However, it is unclear which SAGA subunits are responsible for SAGA's direct interactions with TBP and precisely how SAGA recruits TBP to the promoter. We have used chemical crosslinking to identify Spt8 and Ada1 as potential SAGA subunits that interact with TBP, and we find that both Spt8 and SAGA bind directly to TBP monomer in competition with TBP dimer. We further find that Spt8 and SAGA compete with DNA to bind TBP rather than forming a triple complex. Our results suggest a handoff model for SAGA recruitment of TBP: instead of binding together with TBP at the TATA box, activator-recruited SAGA transfers TBP to the TATA box. This simple model can explain SAGA's observed ability to both activate and repress transcription.

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Year:  2006        PMID: 16888622      PMCID: PMC1553190          DOI: 10.1038/sj.emboj.7601265

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  47 in total

1.  The Spt components of SAGA facilitate TBP binding to a promoter at a post-activator-binding step in vivo.

Authors:  A M Dudley; C Rougeulle; F Winston
Journal:  Genes Dev       Date:  1999-11-15       Impact factor: 11.361

Review 2.  Transcriptional coactivator complexes.

Authors:  A M Näär; B D Lemon; R Tjian
Journal:  Annu Rev Biochem       Date:  2001       Impact factor: 23.643

3.  Components of the SAGA histone acetyltransferase complex are required for repressed transcription of ARG1 in rich medium.

Authors:  Andrea R Ricci; Julie Genereaux; Christopher J Brandl
Journal:  Mol Cell Biol       Date:  2002-06       Impact factor: 4.272

4.  Differential requirement of SAGA components for recruitment of TATA-box-binding protein to promoters in vivo.

Authors:  Sukesh R Bhaumik; Michael R Green
Journal:  Mol Cell Biol       Date:  2002-11       Impact factor: 4.272

5.  The proteasome regulatory particle alters the SAGA coactivator to enhance its interactions with transcriptional activators.

Authors:  Daeyoup Lee; Elena Ezhkova; Bing Li; Samantha G Pattenden; William P Tansey; Jerry L Workman
Journal:  Cell       Date:  2005-11-04       Impact factor: 41.582

6.  The S. cerevisiae SAGA complex functions in vivo as a coactivator for transcriptional activation by Gal4.

Authors:  E Larschan; F Winston
Journal:  Genes Dev       Date:  2001-08-01       Impact factor: 11.361

7.  Recruitment of HAT complexes by direct activator interactions with the ATM-related Tra1 subunit.

Authors:  C E Brown; L Howe; K Sousa; S C Alley; M J Carrozza; S Tan; J L Workman
Journal:  Science       Date:  2001-06-22       Impact factor: 47.728

8.  Transcription activator interactions with multiple SWI/SNF subunits.

Authors:  Kristen E Neely; Ahmed H Hassan; Christine E Brown; LeAnn Howe; Jerry L Workman
Journal:  Mol Cell Biol       Date:  2002-03       Impact factor: 4.272

9.  Regulation of TATA-binding protein binding by the SAGA complex and the Nhp6 high-mobility group protein.

Authors:  Yaxin Yu; Peter Eriksson; Leena T Bhoite; David J Stillman
Journal:  Mol Cell Biol       Date:  2003-03       Impact factor: 4.272

10.  Analysis of Spt7 function in the Saccharomyces cerevisiae SAGA coactivator complex.

Authors:  Pei-Yun Jenny Wu; Fred Winston
Journal:  Mol Cell Biol       Date:  2002-08       Impact factor: 4.272

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  49 in total

Review 1.  ATAC-king the complexity of SAGA during evolution.

Authors:  Gianpiero Spedale; H Th Marc Timmers; W W M Pim Pijnappel
Journal:  Genes Dev       Date:  2012-03-15       Impact factor: 11.361

2.  Roles for Gcn5 in promoting nucleosome assembly and maintaining genome integrity.

Authors:  Rebecca J Burgess; Zhiguo Zhang
Journal:  Cell Cycle       Date:  2010-08-23       Impact factor: 4.534

3.  Direct TFIIA-TFIID protein contacts drive budding yeast ribosomal protein gene transcription.

Authors:  Justin H Layer; P Anthony Weil
Journal:  J Biol Chem       Date:  2013-06-27       Impact factor: 5.157

4.  Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation.

Authors:  Chuanbing Bian; Chao Xu; Jianbin Ruan; Kenneth K Lee; Tara L Burke; Wolfram Tempel; Dalia Barsyte; Jing Li; Minhao Wu; Bo O Zhou; Brian E Fleharty; Ariel Paulson; Abdellah Allali-Hassani; Jin-Qiu Zhou; Georges Mer; Patrick A Grant; Jerry L Workman; Jianye Zang; Jinrong Min
Journal:  EMBO J       Date:  2011-06-17       Impact factor: 11.598

5.  A novel histone fold domain-containing protein that replaces TAF6 in Drosophila SAGA is required for SAGA-dependent gene expression.

Authors:  Vikki M Weake; Selene K Swanson; Arcady Mushegian; Laurence Florens; Michael P Washburn; Susan M Abmayr; Jerry L Workman
Journal:  Genes Dev       Date:  2009-12-15       Impact factor: 11.361

6.  Yeast TFIID serves as a coactivator for Rap1p by direct protein-protein interaction.

Authors:  Krassimira A Garbett; Manish K Tripathi; Belgin Cencki; Justin H Layer; P Anthony Weil
Journal:  Mol Cell Biol       Date:  2006-10-30       Impact factor: 4.272

Review 7.  How eukaryotic genes are transcribed.

Authors:  Bryan J Venters; B Franklin Pugh
Journal:  Crit Rev Biochem Mol Biol       Date:  2009-06       Impact factor: 8.250

8.  Site-specific cross-linking of TBP in vivo and in vitro reveals a direct functional interaction with the SAGA subunit Spt3.

Authors:  Neeman Mohibullah; Steven Hahn
Journal:  Genes Dev       Date:  2008-11-01       Impact factor: 11.361

9.  The S. pombe SAGA complex controls the switch from proliferation to sexual differentiation through the opposing roles of its subunits Gcn5 and Spt8.

Authors:  Dominique Helmlinger; Samuel Marguerat; Judit Villén; Steven P Gygi; Jürg Bähler; Fred Winston
Journal:  Genes Dev       Date:  2008-11-15       Impact factor: 11.361

10.  Acetylation by the transcriptional coactivator Gcn5 plays a novel role in co-transcriptional spliceosome assembly.

Authors:  Felizza Q Gunderson; Tracy L Johnson
Journal:  PLoS Genet       Date:  2009-10-16       Impact factor: 5.917

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