Literature DB >> 16884309

Synthesis, crystal structure, structure-activity relationships, and antiviral activity of a potent SARS coronavirus 3CL protease inhibitor.

Syaulan Yang1, Shu-Jen Chen, Min-Feng Hsu, Jen-Dar Wu, Chien-Te K Tseng, Yu-Fan Liu, Hua-Chien Chen, Chun-Wei Kuo, Chi-Shen Wu, Li-Wen Chang, Wen-Chang Chen, Shao-Ying Liao, Teng-Yuan Chang, Hsin-Hui Hung, Hui-Lin Shr, Cheng-Yuan Liu, Yu-An Huang, Ling-Yin Chang, Jen-Chi Hsu, Clarence J Peters, Andrew H-J Wang, Ming-Chu Hsu.   

Abstract

A potent SARS coronavirus (CoV) 3CL protease inhibitor (TG-0205221, Ki = 53 nM) has been developed. TG-0205221 showed remarkable activity against SARS CoV and human coronavirus (HCoV) 229E replications by reducing the viral titer by 4.7 log (at 5 microM) for SARS CoV and 5.2 log (at 1.25 microM) for HCoV 229E. The crystal structure of TG-0205221 (resolution = 1.93 A) has revealed a unique binding mode comprising a covalent bond, hydrogen bonds, and numerous hydrophobic interactions. Structural comparisons between TG-0205221 and a natural peptide substrate were also discussed. This information may be applied toward the design of other 3CL protease inhibitors.

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Year:  2006        PMID: 16884309     DOI: 10.1021/jm0603926

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  75 in total

1.  Inhibitors of SARS-3CLpro: virtual screening, biological evaluation, and molecular dynamics simulation studies.

Authors:  Prasenjit Mukherjee; Falgun Shah; Prashant Desai; Mitchell Avery
Journal:  J Chem Inf Model       Date:  2011-05-23       Impact factor: 4.956

2.  Discovery, synthesis, and structure-based optimization of a series of N-(tert-butyl)-2-(N-arylamido)-2-(pyridin-3-yl) acetamides (ML188) as potent noncovalent small molecule inhibitors of the severe acute respiratory syndrome coronavirus (SARS-CoV) 3CL protease.

Authors:  Jon Jacobs; Valerie Grum-Tokars; Ya Zhou; Mark Turlington; S Adrian Saldanha; Peter Chase; Aimee Eggler; Eric S Dawson; Yahira M Baez-Santos; Sakshi Tomar; Anna M Mielech; Susan C Baker; Craig W Lindsley; Peter Hodder; Andrew Mesecar; Shaun R Stauffer
Journal:  J Med Chem       Date:  2013-01-03       Impact factor: 7.446

3.  Functional and genetic studies of the substrate specificity of coronavirus infectious bronchitis virus 3C-like proteinase.

Authors:  Shouguo Fang; Hongyuan Shen; Jibin Wang; Felicia P L Tay; Ding Xiang Liu
Journal:  J Virol       Date:  2010-05-05       Impact factor: 5.103

4.  Beyond picomolar affinities: quantitative aspects of noncovalent and covalent binding of drugs to proteins.

Authors:  Adam J T Smith; Xiyun Zhang; Andrew G Leach; K N Houk
Journal:  J Med Chem       Date:  2009-01-22       Impact factor: 7.446

Review 5.  Severe acute respiratory syndrome coronavirus as an agent of emerging and reemerging infection.

Authors:  Vincent C C Cheng; Susanna K P Lau; Patrick C Y Woo; Kwok Yung Yuen
Journal:  Clin Microbiol Rev       Date:  2007-10       Impact factor: 26.132

6.  Inhibitors of Coronavirus 3CL Proteases Protect Cells from Protease-Mediated Cytotoxicity.

Authors:  Samuel J Resnick; Sho Iketani; Seo Jung Hong; Arie Zask; Hengrui Liu; Sungsoo Kim; Schuyler Melore; Fang-Yu Lin; Manoj S Nair; Yaoxing Huang; Sumin Lee; Nicholas E S Tay; Tomislav Rovis; Hee Won Yang; Li Xing; Brent R Stockwell; David D Ho; Alejandro Chavez
Journal:  J Virol       Date:  2021-06-24       Impact factor: 5.103

7.  Structural basis of inhibition specificities of 3C and 3C-like proteases by zinc-coordinating and peptidomimetic compounds.

Authors:  Cheng-Chung Lee; Chih-Jung Kuo; Tzu-Ping Ko; Min-Feng Hsu; Yao-Chen Tsui; Shih-Cheng Chang; Syaulan Yang; Shu-Jen Chen; Hua-Chien Chen; Ming-Chu Hsu; Shin-Ru Shih; Po-Huang Liang; Andrew H-J Wang
Journal:  J Biol Chem       Date:  2009-01-14       Impact factor: 5.157

Review 8.  A review of the latest research on Mpro targeting SARS-COV inhibitors.

Authors:  Huihui Yang; Jinfei Yang
Journal:  RSC Med Chem       Date:  2021-04-14

9.  Unveiling the molecular mechanism of SARS-CoV-2 main protease inhibition from 137 crystal structures using algebraic topology and deep learning.

Authors:  Duc Duy Nguyen; Kaifu Gao; Jiahui Chen; Rui Wang; Guo-Wei Wei
Journal:  Chem Sci       Date:  2020-09-30       Impact factor: 9.825

10.  Two Inhibitors Against the 3C-Like Proteases of Swine Coronavirus and Feline Coronavirus.

Authors:  Mengxin Zhou; Yutong Han; Mengxia Li; Gang Ye; Guiqing Peng
Journal:  Virol Sin       Date:  2021-07-06       Impact factor: 4.327

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