Literature DB >> 16882721

Drosophila Rtf1 functions in histone methylation, gene expression, and Notch signaling.

Kristen Tenney1, Mark Gerber, Anne Ilvarsonn, Jessica Schneider, Maria Gause, Dale Dorsett, Joel C Eissenberg, Ali Shilatifard.   

Abstract

The Rtf1 subunit of the Paf1 complex is required for proper monoubiquitination of histone H2B and methylation of histone H3 on lysines 4 (H3K4) and 79 in yeast Saccharomyces cerevisiae. Using RNAi, we examined the role of Rtf1 in histone methylation and gene expression in Drosophila melanogaster. We show that Drosophila Rtf1 (dRtf1) is required for proper gene expression and development. Furthermore, we show that RNAi-mediated reduction of dRtf1 results in a reduction in histone H3K4 trimethylation levels on bulk histones and chromosomes in vivo, indicating that the histone modification pathway via Rtf1 is conserved among yeast, Drosophila, and human. Recently, it was demonstrated that histone H3K4 methylation mediated via the E3 ligase Bre1 is critical for transcription of Notch target genes in Drosophila. Here we demonstrate that the dRtf1 component of the Paf1 complex functions in Notch signaling.

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Year:  2006        PMID: 16882721      PMCID: PMC1567682          DOI: 10.1073/pnas.0603620103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

Review 1.  Transcriptional elongation by RNA polymerase II and histone methylation.

Authors:  Mark Gerber; Ali Shilatifard
Journal:  J Biol Chem       Date:  2003-05-22       Impact factor: 5.157

2.  Bre1, an E3 ubiquitin ligase required for recruitment and substrate selection of Rad6 at a promoter.

Authors:  Adam Wood; Nevan J Krogan; Jim Dover; Jessica Schneider; Jonathan Heidt; Marry Ann Boateng; Kimberly Dean; Ashkan Golshani; Yi Zhang; Jack F Greenblatt; Mark Johnston; Ali Shilatifard
Journal:  Mol Cell       Date:  2003-01       Impact factor: 17.970

3.  The Rtf1 component of the Paf1 transcriptional elongation complex is required for ubiquitination of histone H2B.

Authors:  Huck Hui Ng; Sudhanshu Dole; Kevin Struhl
Journal:  J Biol Chem       Date:  2003-07-21       Impact factor: 5.157

4.  The Paf1 complex is essential for histone monoubiquitination by the Rad6-Bre1 complex, which signals for histone methylation by COMPASS and Dot1p.

Authors:  Adam Wood; Jessica Schneider; Jim Dover; Mark Johnston; Ali Shilatifard
Journal:  J Biol Chem       Date:  2003-07-21       Impact factor: 5.157

5.  RNA polymerase II elongation factors of Saccharomyces cerevisiae: a targeted proteomics approach.

Authors:  Nevan J Krogan; Minkyu Kim; Seong Hoon Ahn; Guoqing Zhong; Michael S Kobor; Gerard Cagney; Andrew Emili; Ali Shilatifard; Stephen Buratowski; Jack F Greenblatt
Journal:  Mol Cell Biol       Date:  2002-10       Impact factor: 4.272

Review 6.  A COMPASS in the voyage of defining the role of trithorax/MLL-containing complexes: linking leukemogensis to covalent modifications of chromatin.

Authors:  Kristen Tenney; Ali Shilatifard
Journal:  J Cell Biochem       Date:  2005-06-01       Impact factor: 4.429

7.  In vivo requirement of the RNA polymerase II elongation factor elongin A for proper gene expression and development.

Authors:  Mark Gerber; Joel C Eissenberg; Stephanie Kong; Kristen Tenney; Joan Weliky Conaway; Ronald C Conaway; Ali Shilatifard
Journal:  Mol Cell Biol       Date:  2004-11       Impact factor: 4.272

8.  The human PAF complex coordinates transcription with events downstream of RNA synthesis.

Authors:  Bing Zhu; Subhrangsu S Mandal; Anh-Dung Pham; Yong Zheng; Hediye Erdjument-Bromage; Surinder K Batra; Paul Tempst; Danny Reinberg
Journal:  Genes Dev       Date:  2005-07-15       Impact factor: 11.361

9.  Bre1 is required for Notch signaling and histone modification.

Authors:  Sarah Bray; Hannah Musisi; Mariann Bienz
Journal:  Dev Cell       Date:  2005-02       Impact factor: 12.270

10.  Menin associates with a trithorax family histone methyltransferase complex and with the hoxc8 locus.

Authors:  Christina M Hughes; Orit Rozenblatt-Rosen; Thomas A Milne; Terry D Copeland; Stuart S Levine; Jeffrey C Lee; D Neil Hayes; Kalai Selvi Shanmugam; Arindam Bhattacharjee; Christine A Biondi; Graham F Kay; Nicholas K Hayward; Jay L Hess; Matthew Meyerson
Journal:  Mol Cell       Date:  2004-02-27       Impact factor: 17.970

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  45 in total

Review 1.  The COMPASS family of histone H3K4 methylases: mechanisms of regulation in development and disease pathogenesis.

Authors:  Ali Shilatifard
Journal:  Annu Rev Biochem       Date:  2012       Impact factor: 23.643

Review 2.  Trithorax group proteins: switching genes on and keeping them active.

Authors:  Bernd Schuettengruber; Anne-Marie Martinez; Nicola Iovino; Giacomo Cavalli
Journal:  Nat Rev Mol Cell Biol       Date:  2011-11-23       Impact factor: 94.444

3.  Novel trans-tail regulation of H2B ubiquitylation and H3K4 methylation by the N terminus of histone H2A.

Authors:  Suting Zheng; John J Wyrick; Joseph C Reese
Journal:  Mol Cell Biol       Date:  2010-05-24       Impact factor: 4.272

4.  The PAF1 complex component Leo1 is essential for cardiac and neural crest development in zebrafish.

Authors:  Catherine T Nguyen; Adam Langenbacher; Michael Hsieh; Jau-Nian Chen
Journal:  Dev Biol       Date:  2010-02-21       Impact factor: 3.582

5.  The human PAF1 complex acts in chromatin transcription elongation both independently and cooperatively with SII/TFIIS.

Authors:  Jaehoon Kim; Mohamed Guermah; Robert G Roeder
Journal:  Cell       Date:  2010-02-19       Impact factor: 41.582

6.  DSIF, the Paf1 complex, and Tat-SF1 have nonredundant, cooperative roles in RNA polymerase II elongation.

Authors:  Yexi Chen; Yuki Yamaguchi; Yuta Tsugeno; Junichi Yamamoto; Tomoko Yamada; Mitsuhiro Nakamura; Koji Hisatake; Hiroshi Handa
Journal:  Genes Dev       Date:  2009-12-01       Impact factor: 11.361

7.  The Paf1 complex represses SER3 transcription in Saccharomyces cerevisiae by facilitating intergenic transcription-dependent nucleosome occupancy of the SER3 promoter.

Authors:  Justin A Pruneski; Sarah J Hainer; Kostadin O Petrov; Joseph A Martens
Journal:  Eukaryot Cell       Date:  2011-08-26

Review 8.  Flickin' the ubiquitin switch: the role of H2B ubiquitylation in development.

Authors:  Duncan Edward Wright; Chen-Yi Wang; Cheng-Fu Kao
Journal:  Epigenetics       Date:  2011-10-01       Impact factor: 4.528

9.  The role of the SPT6 chromatin remodeling factor in zebrafish embryogenesis.

Authors:  Fatma O Kok; Emma Oster; Laura Mentzer; Jen-Chih Hsieh; Clarissa A Henry; Howard I Sirotkin
Journal:  Dev Biol       Date:  2007-05-03       Impact factor: 3.582

10.  Regulation of the transcriptional activity of poised RNA polymerase II by the elongation factor ELL.

Authors:  Edwin R Smith; Benjamin Winter; Joel C Eissenberg; Ali Shilatifard
Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-17       Impact factor: 11.205

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