Literature DB >> 16881818

Gene regulation by chromatin structure: paradigms established in Drosophila melanogaster.

Sandra R Schulze1, Lori L Wallrath.   

Abstract

Studies in Drosophila melanogaster have revealed paradigms for regulating gene expression through chromatin structure, including mechanisms of gene activation and silencing. Regulation occurs at the level of individual genes, chromosomal domains, and entire chromosomes. The chromatin state is dynamic, allowing for changes in gene expression in response to cellular signals and/or environmental cues. Changes in chromatin result from the action of ATP-dependent chromatin-remodeling complexes, reversible epigenetic histone modifications, and the incorporation of histone variants. Many of the chromatin-based transcriptional regulatory mechanisms discovered in D. melanogaster are evolutionarily conserved and therefore serve as a foundation for studies in other organisms.

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Year:  2007        PMID: 16881818     DOI: 10.1146/annurev.ento.51.110104.151007

Source DB:  PubMed          Journal:  Annu Rev Entomol        ISSN: 0066-4170            Impact factor:   19.686


  32 in total

1.  Y not a dead end: epistatic interactions between Y-linked regulatory polymorphisms and genetic background affect global gene expression in Drosophila melanogaster.

Authors:  Pan-Pan Jiang; Daniel L Hartl; Bernardo Lemos
Journal:  Genetics       Date:  2010-06-15       Impact factor: 4.562

2.  Epigenetic effects of polymorphic Y chromosomes modulate chromatin components, immune response, and sexual conflict.

Authors:  Bernardo Lemos; Alan T Branco; Daniel L Hartl
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-23       Impact factor: 11.205

3.  The enhancer of trithorax and polycomb gene Caf1/p55 is essential for cell survival and patterning in Drosophila development.

Authors:  Aimée E Anderson; Umesh C Karandikar; Kathryn L Pepple; Zhihong Chen; Andreas Bergmann; Graeme Mardon
Journal:  Development       Date:  2011-04-13       Impact factor: 6.868

Review 4.  Drosophila telomeres: an exception providing new insights.

Authors:  James M Mason; Radmila Capkova Frydrychova; Harald Biessmann
Journal:  Bioessays       Date:  2008-01       Impact factor: 4.345

Review 5.  New perspectives on the diversification of the RNA interference system: insights from comparative genomics and small RNA sequencing.

Authors:  Alexander Maxwell Burroughs; Yoshinari Ando; L Aravind
Journal:  Wiley Interdiscip Rev RNA       Date:  2013-12-05       Impact factor: 9.957

Review 6.  Position-effect variegation, heterochromatin formation, and gene silencing in Drosophila.

Authors:  Sarah C R Elgin; Gunter Reuter
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-08-01       Impact factor: 10.005

7.  RNA editing regulates transposon-mediated heterochromatic gene silencing.

Authors:  Yiannis A Savva; James E C Jepson; Yao-Jen Chang; Rachel Whitaker; Brian C Jones; Georges St Laurent; Michael R Tackett; Philipp Kapranov; Nan Jiang; Guyu Du; Stephen L Helfand; Robert A Reenan
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

8.  Structural basis for recognition of H3K4 methylation status by the DNA methyltransferase 3A ATRX-DNMT3-DNMT3L domain.

Authors:  Junji Otani; Toshiyuki Nankumo; Kyohei Arita; Susumu Inamoto; Mariko Ariyoshi; Masahiro Shirakawa
Journal:  EMBO Rep       Date:  2009-10-16       Impact factor: 8.807

9.  Chromatin-remodelling proteins of the pea aphid, Acyrthosiphon pisum (Harris).

Authors:  S D Rider; D G Srinivasan; R S Hilgarth
Journal:  Insect Mol Biol       Date:  2010-03       Impact factor: 3.585

10.  Predicting nucleosome positions on the DNA: combining intrinsic sequence preferences and remodeler activities.

Authors:  Vladimir B Teif; Karsten Rippe
Journal:  Nucleic Acids Res       Date:  2009-07-22       Impact factor: 16.971

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