Literature DB >> 16880959

Feedback dynamics and cell function: Why systems biology is called Systems Biology.

Olaf Wolkenhauer1, Mihajlo Mesarovic.   

Abstract

A new paradigm, like Systems Biology, should challenge the way research has been conducted previously. This Opinion article aims to present Systems Biology, not as the application of engineering principles to biology but as a merger of systems- and control theory with molecular- and cell biology. In our view, the central dogma of Systems Biology is that it is system dynamics that gives rise to the functioning and function of cells. The concepts of feedback regulation and control of pathways and the coordination of cell function are emphasized as an important area of Systems Biology research. The hurdles and risks for this area are discussed from the perspective of dynamic pathway modelling. Most of all, the aim of this article is to promote mathematical modelling and simulation as a part of molecular- and cell biology. Systems Biology is a success if it is widely accepted that there is nothing more practical than a good theory.

Mesh:

Year:  2005        PMID: 16880959     DOI: 10.1039/b502088n

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN: 1742-2051


  15 in total

1.  Bistable switches control memory and plasticity in cellular differentiation.

Authors:  Lei Wang; Brandon L Walker; Stephen Iannaccone; Devang Bhatt; Patrick J Kennedy; William T Tse
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-06       Impact factor: 11.205

Review 2.  Clinico-pathologic function of cerebral ABC transporters - implications for the pathogenesis of Alzheimer's disease.

Authors:  Jens Pahnke; Olaf Wolkenhauer; Markus Krohn; Lary C Walker
Journal:  Curr Alzheimer Res       Date:  2008-08       Impact factor: 3.498

3.  The role of dynamic stimulation pattern in the analysis of bistable intracellular networks.

Authors:  Thomas Millat; Sree N Sreenath; Radina P Soebiyanto; Jayant Avva; Kwang-Hyun Cho; Olaf Wolkenhauer
Journal:  Biosystems       Date:  2008-04-04       Impact factor: 1.973

4.  Lose and gain: impacts of ERK5 and JNK cascades on each other.

Authors:  Sundaramurthy Pandurangan; Sunita Gakkhar
Journal:  Syst Synth Biol       Date:  2010-07-29

5.  A New Bistable Switch Model of Alzheimer's Disease Pathogenesis.

Authors:  Bruno Burlando; Serena Losacco; Viviana Villa; Ernesto Fedele; Roberta Ricciarelli
Journal:  Int J Mol Sci       Date:  2022-06-25       Impact factor: 6.208

6.  The spatial structure of cell signaling systems.

Authors:  Ruth Nussinov
Journal:  Phys Biol       Date:  2013-08-02       Impact factor: 2.583

7.  On the epistemological crisis in genomics.

Authors:  Edward R Dougherty
Journal:  Curr Genomics       Date:  2008-04       Impact factor: 2.236

8.  Dynamical pathway analysis.

Authors:  Hao Xiong; Yoonsuck Choe
Journal:  BMC Syst Biol       Date:  2008-01-27

9.  Differential dynamic properties of scleroderma fibroblasts in response to perturbation of environmental stimuli.

Authors:  Momiao Xiong; Frank C Arnett; Xinjian Guo; Hao Xiong; Xiaodong Zhou
Journal:  PLoS One       Date:  2008-02-27       Impact factor: 3.240

Review 10.  Reverse engineering and identification in systems biology: strategies, perspectives and challenges.

Authors:  Alejandro F Villaverde; Julio R Banga
Journal:  J R Soc Interface       Date:  2013-12-04       Impact factor: 4.118

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