Literature DB >> 16880927

Microfluidics-based systems biology.

David N Breslauer1, Philip J Lee, Luke P Lee.   

Abstract

Systems biology seeks to develop a complete understanding of cellular mechanisms by studying the functions of intra- and inter-cellular molecular interactions that trigger and coordinate cellular events. However, the complexity of biological systems causes accurate and precise systems biology experimentation to be a difficult task. Most biological experimentation focuses on highly detailed investigation of a single signaling mechanism, which lacks the throughput necessary to reconstruct the entirety of the biological system, while high-throughput testing often lacks the fidelity and detail necessary to fully comprehend the mechanisms of signal propagation. Systems biology experimentation, however, can benefit greatly from the progress in the development of microfluidic devices. Microfluidics provides the opportunity to study cells effectively on both a single- and multi-cellular level with high-resolution and localized application of experimental conditions with biomimetic physiological conditions. Additionally, the ability to massively array devices on a chip opens the door for high-throughput, high fidelity experimentation to aid in accurate and precise unraveling of the intertwined signaling systems that compose the inner workings of the cell.

Entities:  

Mesh:

Year:  2006        PMID: 16880927     DOI: 10.1039/b515632g

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN: 1742-2051


  45 in total

1.  The renaissance of continuous culture in the post-genomics age.

Authors:  Alan T Bull
Journal:  J Ind Microbiol Biotechnol       Date:  2010-09-11       Impact factor: 3.346

2.  DNA-encoded antibody libraries: a unified platform for multiplexed cell sorting and detection of genes and proteins.

Authors:  Ryan C Bailey; Gabriel A Kwong; Caius G Radu; Owen N Witte; James R Heath
Journal:  J Am Chem Soc       Date:  2007-01-30       Impact factor: 15.419

3.  Polymer-based dense fluidic networks for high throughput screening with ultrasensitive fluorescence detection.

Authors:  Paul I Okagbare; Steven Allan Soper
Journal:  Electrophoresis       Date:  2010-09       Impact factor: 3.535

4.  High-throughput microscopy must re-invent the microscope rather than speed up its functions.

Authors:  M Oheim
Journal:  Br J Pharmacol       Date:  2007-07-02       Impact factor: 8.739

5.  Microfluidic System for Automated Cell-based Assays.

Authors:  Philip J Lee; Navid Ghorashian; Terry A Gaige; Paul J Hung
Journal:  JALA Charlottesv Va       Date:  2007-12

Review 6.  Managing evaporation for more robust microscale assays. Part 2. Characterization of convection and diffusion for cell biology.

Authors:  Erwin Berthier; Jay Warrick; Hongmeiy Yu; David J Beebe
Journal:  Lab Chip       Date:  2008-04-08       Impact factor: 6.799

7.  Dynamic control and quantification of bacterial population dynamics in droplets.

Authors:  Shuqiang Huang; Jaydeep K Srimani; Anna J Lee; Ying Zhang; Allison J Lopatkin; Kam W Leong; Lingchong You
Journal:  Biomaterials       Date:  2015-05-19       Impact factor: 12.479

Review 8.  Screening the cellular microenvironment: a role for microfluidics.

Authors:  Jay W Warrick; William L Murphy; David J Beebe
Journal:  IEEE Rev Biomed Eng       Date:  2008-11-05

9.  Micro-bioreactor arrays for controlling cellular environments: design principles for human embryonic stem cell applications.

Authors:  Elisa Cimetta; Elisa Figallo; Christopher Cannizzaro; Nicola Elvassore; Gordana Vunjak-Novakovic
Journal:  Methods       Date:  2008-10-24       Impact factor: 3.608

10.  Developing optimal input design strategies in cancer systems biology with applications to microfluidic device engineering.

Authors:  Filippo Menolascina; Domenico Bellomo; Thomas Maiwald; Vitoantonio Bevilacqua; Caterina Ciminelli; Angelo Paradiso; Stefania Tommasi
Journal:  BMC Bioinformatics       Date:  2009-10-15       Impact factor: 3.169

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