Literature DB >> 16880553

Preliminary X-ray crystallographic analysis of the catalytic domain of prophenoloxidase activating factor-I.

Shunfu Piao1, Ji Young Jung, Ji Won Park, Jaewon Lee, Bok Leul Lee, Nam Chul Ha.   

Abstract

Clip-domain serine proteases (SPs) have been identified in invertebrates as crucial enzymes that are involved in diverse extracellular signalling pathways. Prophenoloxidase (proPO) activating factor-I (PPAF-I), a catalytically active clip-domain SP, cleaves proPO. To date, no crystal structures of a catalytically active clip-domain SP have been determined. Here, the results of crystallization and preliminary X-ray analysis of the SP domain of PPAF-I are reported. The crystal of the PPAF-I SP domain was obtained using the hanging-drop vapour-diffusion method in a precipitant solution containing 0.15 M lithium sulfate, 30% polyethylene glycol 4000 and 0.1 M Tris-HCl pH 8.0. The crystal diffracts X-rays to 1.7 angstroms resolution using a synchrotron-radiation source. The crystal belongs to space group P2(1)2(1)2(1), with one molecule in the asymmetric unit and unit-cell parameters a = 38.3, b = 53.3, c = 116.6 angstroms, alpha = beta = gamma = 90 degrees. A molecular-replacement solution has been found using kallikrein as a starting model, resulting in an interpretable electron-density map.

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Year:  2006        PMID: 16880553      PMCID: PMC2242929          DOI: 10.1107/S1744309106025851

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  10 in total

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Authors:  J Navaza
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2001-09-21

2.  Crystal structure of a clip-domain serine protease and functional roles of the clip domains.

Authors:  Shunfu Piao; Young-Lan Song; Jung Hyun Kim; Sam Yong Park; Ji Won Park; Bok Leul Lee; Byung-Ha Oh; Nam-Chul Ha
Journal:  EMBO J       Date:  2005-12-15       Impact factor: 11.598

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Journal:  Annu Rev Genet       Date:  1995       Impact factor: 16.830

Review 4.  Pinning down positional information: dorsal-ventral polarity in the Drosophila embryo.

Authors:  K V Anderson
Journal:  Cell       Date:  1998-11-13       Impact factor: 41.582

5.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

6.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

7.  Expression, crystallization, and three-dimensional structure of the catalytic domain of human plasma kallikrein.

Authors:  Jie Tang; Christine Luong Yu; Steven R Williams; Eric Springman; Douglas Jeffery; Paul A Sprengeler; Alberto Estevez; Jun Sampang; William Shrader; Jeff Spencer; Wendy Young; Mary McGrath; Bradley A Katz
Journal:  J Biol Chem       Date:  2005-09-30       Impact factor: 5.157

8.  A masquerade-like serine proteinase homologue is necessary for phenoloxidase activity in the coleopteran insect, Holotrichia diomphalia larvae.

Authors:  T H Kwon; M S Kim; H W Choi; C H Joo; M Y Cho; B L Lee
Journal:  Eur J Biochem       Date:  2000-10

9.  Molecular cloning of cDNA for pro-phenol-oxidase-activating factor I, a serine protease is induced by lipopolysaccharide or 1,3-beta-glucan in coleopteran insect, Holotrichia diomphalia larvae.

Authors:  S Y Lee; M Y Cho; J H Hyun; K M Lee; K I Homma; S Natori; S I Kawabata; S Iwanaga; B L Lee
Journal:  Eur J Biochem       Date:  1998-11-01

10.  Three-dimensional models of proteases involved in patterning of the Drosophila Embryo. Crucial role of predicted cation binding sites.

Authors:  Thierry Rose; Ellen K LeMosy; Angelene M Cantwell; Dolly Banerjee-Roy; James B Skeath; Enrico Di Cera
Journal:  J Biol Chem       Date:  2002-12-18       Impact factor: 5.157

  10 in total
  1 in total

1.  Disorder and cysteines in proteins: A design for orchestration of conformational see-saw and modulatory functions.

Authors:  Anukool A Bhopatkar; Vladimir N Uversky; Vijayaraghavan Rangachari
Journal:  Prog Mol Biol Transl Sci       Date:  2020-06-27       Impact factor: 3.622

  1 in total

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