Literature DB >> 16879409

A camel passes through the eye of a needle: protein unfolding activity of Clp ATPases.

Michal Zolkiewski1.   

Abstract

Clp ATPases are protein machines involved in protein degradation and disaggregation. The common structural feature of Clp ATPases is the formation of ring-shaped oligomers. Recent work has shown that the function of all Clp ATPases is based on an energy-dependent threading of substrates through the narrow pore at the centre of the ring. This review gives an outline of known mechanistic principles of threading machines that unfold protein substrates either before their degradation (ClpA, ClpX, HslU) or during their reactivation from aggregates (ClpB). The place of Clp ATPases within a broad AAA+ superfamily of ATPases associated with various cellular activities suggests that similar mechanisms can be used by other protein machines to induce conformational rearrangements in a wide variety of substrates.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16879409      PMCID: PMC1852505          DOI: 10.1111/j.1365-2958.2006.05309.x

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  49 in total

1.  Sequential mechanism of solubilization and refolding of stable protein aggregates by a bichaperone network.

Authors:  P Goloubinoff; A Mogk; A P Zvi; T Tomoyasu; B Bukau
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

2.  ClpA mediates directional translocation of substrate proteins into the ClpP protease.

Authors:  B G Reid; W A Fenton; A L Horwich; E U Weber-Ban
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-20       Impact factor: 11.205

3.  Dynamics of substrate denaturation and translocation by the ClpXP degradation machine.

Authors:  Y I Kim; R E Burton; B M Burton; R T Sauer; T A Baker
Journal:  Mol Cell       Date:  2000-04       Impact factor: 17.970

4.  Unfolding and internalization of proteins by the ATP-dependent proteases ClpXP and ClpAP.

Authors:  S K Singh; R Grimaud; J R Hoskins; S Wickner; M R Maurizi
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-01       Impact factor: 11.205

5.  Nucleotide-dependent conformational changes in a protease-associated ATPase HsIU.

Authors:  J Wang; J J Song; I S Seong; M C Franklin; S Kamtekar; S H Eom; C H Chung
Journal:  Structure       Date:  2001-11       Impact factor: 5.006

Review 6.  AAA+ superfamily ATPases: common structure--diverse function.

Authors:  T Ogura; A J Wilkinson
Journal:  Genes Cells       Date:  2001-07       Impact factor: 1.891

7.  ATP-dependent proteases degrade their substrates by processively unraveling them from the degradation signal.

Authors:  C Lee; M P Schwartz; S Prakash; M Iwakura; A Matouschek
Journal:  Mol Cell       Date:  2001-03       Impact factor: 17.970

8.  Effects of protein stability and structure on substrate processing by the ClpXP unfolding and degradation machine.

Authors:  R E Burton; S M Siddiqui; Y I Kim; T A Baker; R T Sauer
Journal:  EMBO J       Date:  2001-06-15       Impact factor: 11.598

9.  Microtubule disassembly by ATP-dependent oligomerization of the AAA enzyme katanin.

Authors:  J J Hartman; R D Vale
Journal:  Science       Date:  1999-10-22       Impact factor: 47.728

Review 10.  AAA proteins. Lords of the ring.

Authors:  R D Vale
Journal:  J Cell Biol       Date:  2000-07-10       Impact factor: 10.539

View more
  52 in total

Review 1.  Aggregate reactivation mediated by the Hsp100 chaperones.

Authors:  Michal Zolkiewski; Ting Zhang; Maria Nagy
Journal:  Arch Biochem Biophys       Date:  2012-01-28       Impact factor: 4.013

2.  YscU/FlhB of Yersinia pseudotuberculosis Harbors a C-terminal Type III Secretion Signal.

Authors:  Frédéric H Login; Hans Wolf-Watz
Journal:  J Biol Chem       Date:  2015-09-03       Impact factor: 5.157

3.  Collaboration between the ClpB AAA+ remodeling protein and the DnaK chaperone system.

Authors:  Shannon M Doyle; Joel R Hoskins; Sue Wickner
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-01       Impact factor: 11.205

4.  Characterization of a Coxiella burnetii ftsZ mutant generated by Himar1 transposon mutagenesis.

Authors:  Paul A Beare; Dale Howe; Diane C Cockrell; Anders Omsland; Bryan Hansen; Robert A Heinzen
Journal:  J Bacteriol       Date:  2008-12-29       Impact factor: 3.490

Review 5.  Protein rescue from aggregates by powerful molecular chaperone machines.

Authors:  Shannon M Doyle; Olivier Genest; Sue Wickner
Journal:  Nat Rev Mol Cell Biol       Date:  2013-10       Impact factor: 94.444

6.  Directed screen of Francisella novicida virulence determinants using Drosophila melanogaster.

Authors:  Monika K Ahlund; Patrik Rydén; Anders Sjöstedt; Svenja Stöven
Journal:  Infect Immun       Date:  2010-05-17       Impact factor: 3.441

7.  Coupling ATP utilization to protein remodeling by ClpB, a hexameric AAA+ protein.

Authors:  Joel R Hoskins; Shannon M Doyle; Sue Wickner
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-25       Impact factor: 11.205

8.  GroEL-induced topological dislocation of a substrate protein β-sheet core: a solution EPR spin-spin distance study.

Authors:  Rikard Owenius; Anngelica Jarl; Bengt-Harald Jonsson; Uno Carlsson; Per Hammarström
Journal:  J Chem Biol       Date:  2010-04-11

9.  Activation of interspecies-hybrid Rubisco enzymes to assess different models for the Rubisco-Rubisco activase interaction.

Authors:  Rebekka M Wachter; Michael E Salvucci; A Elizabete Carmo-Silva; Csengele Barta; Todor Genkov; Robert J Spreitzer
Journal:  Photosynth Res       Date:  2013-04-24       Impact factor: 3.573

10.  Infection with Francisella tularensis LVS clpB leads to an altered yet protective immune response.

Authors:  Lydia M Barrigan; Shraddha Tuladhar; Jason C Brunton; Matthew D Woolard; Ching-ju Chen; Divey Saini; Richard Frothingham; Gregory D Sempowski; Thomas H Kawula; Jeffrey A Frelinger
Journal:  Infect Immun       Date:  2013-03-25       Impact factor: 3.441

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.