Literature DB >> 16876264

A computer-based, image-analysis method to quantify HIV-1 infection in a single-cycle infectious center assay.

John R Day1, Laura E Martínez, Roman Sásik, Douglas L Hitchin, Megan E Dueck, Douglas D Richman, John C Guatelli.   

Abstract

Rapid and precise quantitation of the infectivity of HIV is important for molecular virologic studies as well as for measuring the activities of antiviral drugs and neutralizing antibodies. In the present study, an indicator cell line and image-analysis software were used to quantify HIV infectivity. Cells of the P4R5 line, which express the receptors for HIV infection as well as beta-galactosidase under the control of the HIV-1 long terminal repeat, were infected either with CXCR4- or CCR5-using viruses, including primary isolates, then stained 2 days later with X-gal to turn infected cells blue. Digital images of monolayers of the infected cells were captured using a high resolution CCD video camera and a macro video zoom lens. A software program was developed to process the images and to count the blue-stained foci of infection. The assay was applied to assess the infectivity of site-directed viral mutants, and to measure the activity of antiviral drugs and neutralizing antibody. The results indicate that the described method allows for the rapid quantitation of infected cells over a wide range of viral inocula with reproducibility, accuracy and relatively low cost.

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Year:  2006        PMID: 16876264     DOI: 10.1016/j.jviromet.2006.06.019

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  14 in total

1.  Probing chelation motifs in HIV integrase inhibitors.

Authors:  Arpita Agrawal; Jamie DeSoto; Jessica L Fullagar; Kasthuraiah Maddali; Shahrzad Rostami; Douglas D Richman; Yves Pommier; Seth M Cohen
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-27       Impact factor: 11.205

2.  Characteristics of the cellular receptor influence the intracellular fate and efficiency of virus infection.

Authors:  Robin L Krueger; Lorraine M Albritton
Journal:  J Virol       Date:  2013-03-20       Impact factor: 5.103

3.  Phosphoserine acidic cluster motifs bind distinct basic regions on the μ subunits of clathrin adaptor protein complexes.

Authors:  Rajendra Singh; Charlotte Stoneham; Christopher Lim; Xiaofei Jia; Javier Guenaga; Richard Wyatt; Joel O Wertheim; Yong Xiong; John Guatelli
Journal:  J Biol Chem       Date:  2018-08-22       Impact factor: 5.157

4.  An N-Glycosylated Form of SERINC5 Is Specifically Incorporated into HIV-1 Virions.

Authors:  Shilpi Sharma; Mary K Lewinski; John Guatelli
Journal:  J Virol       Date:  2018-10-29       Impact factor: 5.103

5.  Quantitative Temporal Viromics of an Inducible HIV-1 Model Yields Insight to Global Host Targets and Phospho-Dynamics Associated with Protein Vpr.

Authors:  John D Lapek; Mary K Lewinski; Jacob M Wozniak; John Guatelli; David J Gonzalez
Journal:  Mol Cell Proteomics       Date:  2017-06-12       Impact factor: 5.911

6.  Evidence against a direct antiviral activity of the proteasome during the early steps of HIV-1 replication.

Authors:  Megan Dueck; John Guatelli
Journal:  Virology       Date:  2007-02-21       Impact factor: 3.616

7.  Direct restriction of virus release and incorporation of the interferon-induced protein BST-2 into HIV-1 particles.

Authors:  Kathleen Fitzpatrick; Mark Skasko; Thomas J Deerinck; John Crum; Mark H Ellisman; John Guatelli
Journal:  PLoS Pathog       Date:  2010-03-05       Impact factor: 6.823

8.  Activities of transmitted/founder and chronic clade B HIV-1 Vpu and a C-terminal polymorphism specifically affecting virion release.

Authors:  Moein Jafari; John Guatelli; Mary K Lewinski
Journal:  J Virol       Date:  2014-02-26       Impact factor: 5.103

9.  CD44 microbeads accelerate HIV-1 infection in T cells.

Authors:  Valeri H Terry; Ian C D Johnston; Celsa A Spina
Journal:  Virology       Date:  2009-04-23       Impact factor: 3.616

10.  A Conserved Acidic-Cluster Motif in SERINC5 Confers Partial Resistance to Antagonism by HIV-1 Nef.

Authors:  Charlotte A Stoneham; Peter W Ramirez; Rajendra Singh; Marissa Suarez; Andrew Debray; Christopher Lim; Xiaofei Jia; Yong Xiong; John Guatelli
Journal:  J Virol       Date:  2020-03-17       Impact factor: 5.103

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