Literature DB >> 16872400

Pirellula and OM43 are among the dominant lineages identified in an Oregon coast diatom bloom.

R M Morris1, K Longnecker, S J Giovannoni.   

Abstract

Although bacterioplankton and phytoplankton are generally perceived as closely linked in marine systems, specific interactions between discrete bacterioplankton and phytoplankton populations are largely unknown. However, measurements of bacterioplankton distributions during phytoplankton blooms may indicate specific microbial lineages that are responding to phytoplankton populations, and potentially controlling them by producing allelopathic compounds. Here we use a comprehensive molecular approach to identify, characterize and quantify bacterioplankton community responses to an Oregon coast diatom bloom. Total DAPI counts increased by nearly sevenfold in bloom samples, reaching 5.7 x 10(9) cells l(-1), and lineage-specific cell counts using fluorescence in situ hybridization (FISH) indicated that Bacteria accounted for approximately 89% of observed increases. Several dominant members of the bacterial community present outside the bloom (SAR11 and SAR86) did not contribute significantly to observed increases in bloom samples. Clone library and FISH data indicated that uncultured planctomycetes most closely related to Pirellula, and members of the OM43 clade of beta proteobacteria, reached 0.5 x 10(8) and 1.2 x 10(8) cells l(-1), respectively, and were among the dominant lineages in bloom samples.

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Year:  2006        PMID: 16872400     DOI: 10.1111/j.1462-2920.2006.01029.x

Source DB:  PubMed          Journal:  Environ Microbiol        ISSN: 1462-2912            Impact factor:   5.491


  59 in total

1.  Differing growth responses of major phylogenetic groups of marine bacteria to natural phytoplankton blooms in the western North Pacific Ocean.

Authors:  Yuya Tada; Akito Taniguchi; Ippei Nagao; Takeshi Miki; Mitsuo Uematsu; Atsushi Tsuda; Koji Hamasaki
Journal:  Appl Environ Microbiol       Date:  2011-04-22       Impact factor: 4.792

2.  Cultivation and ecosystem role of a marine roseobacter clade-affiliated cluster bacterium.

Authors:  Xavier Mayali; Peter J S Franks; Farooq Azam
Journal:  Appl Environ Microbiol       Date:  2008-03-07       Impact factor: 4.792

3.  Different Planctomycetes diversity patterns in latitudinal surface seawater of the open sea and in sediment.

Authors:  Qinglong Shu; Nianzhi Jiao
Journal:  J Microbiol       Date:  2008-06-11       Impact factor: 3.422

4.  Determining indicator taxa across spatial and seasonal gradients in the Columbia River coastal margin.

Authors:  Caroline S Fortunato; Alexander Eiler; Lydie Herfort; Joseph A Needoba; Tawnya D Peterson; Byron C Crump
Journal:  ISME J       Date:  2013-05-30       Impact factor: 10.302

5.  The genomic basis of trophic strategy in marine bacteria.

Authors:  Federico M Lauro; Diane McDougald; Torsten Thomas; Timothy J Williams; Suhelen Egan; Scott Rice; Matthew Z DeMaere; Lily Ting; Haluk Ertan; Justin Johnson; Steven Ferriera; Alla Lapidus; Iain Anderson; Nikos Kyrpides; A Christine Munk; Chris Detter; Cliff S Han; Mark V Brown; Frank T Robb; Staffan Kjelleberg; Ricardo Cavicchioli
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-08       Impact factor: 11.205

Review 6.  Beyond the bacterium: planctomycetes challenge our concepts of microbial structure and function.

Authors:  John A Fuerst; Evgeny Sagulenko
Journal:  Nat Rev Microbiol       Date:  2011-06       Impact factor: 60.633

7.  The ecology of pelagic freshwater methylotrophs assessed by a high-resolution monitoring and isolation campaign.

Authors:  Michaela M Salcher; Stefan M Neuenschwander; Thomas Posch; Jakob Pernthaler
Journal:  ISME J       Date:  2015-05-05       Impact factor: 10.302

8.  Diverse, uncultivated bacteria and archaea underlying the cycling of dissolved protein in the ocean.

Authors:  William D Orsi; Jason M Smith; Shuting Liu; Zhanfei Liu; Carole M Sakamoto; Susanne Wilken; Camille Poirier; Thomas A Richards; Patrick J Keeling; Alexandra Z Worden; Alyson E Santoro
Journal:  ISME J       Date:  2016-03-08       Impact factor: 10.302

9.  Comprehensive Genomic Analyses of the OM43 Clade, Including a Novel Species from the Red Sea, Indicate Ecotype Differentiation among Marine Methylotrophs.

Authors:  Francy Jimenez-Infante; David Kamanda Ngugi; Manikandan Vinu; Intikhab Alam; Allan Anthony Kamau; Jochen Blom; Vladimir B Bajic; Ulrich Stingl
Journal:  Appl Environ Microbiol       Date:  2015-12-11       Impact factor: 4.792

10.  Planctomycetes dominate biofilms on surfaces of the kelp Laminaria hyperborea.

Authors:  Mia M Bengtsson; Lise Øvreås
Journal:  BMC Microbiol       Date:  2010-10-15       Impact factor: 3.605

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