Literature DB >> 16871776

[SNP markers: methods of analysis, ways of development, and comparison on an example of common wheat].

E K Khlestkina, E A Salina.   

Abstract

SNPs (single nucleotide polymorphisms), which belong to the last-generation molecular markers, occur at high frequencies in both animal and plant genomes. The development of SNP markers allows to automatize and enhance tenfolds the effectiveness of genotype analysis. This review summarizes literature data on methods of SNP polymorphism analysis. Various methods of developing SNP markers are considered, taking common wheat Triticum aestivum L. as an example. These markers are compared to other DNA markers, in order to ensure adequate choice of marker type for solving various molecular genetic problems.

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Year:  2006        PMID： 16871776

Source DB:  PubMed          Journal:  Genetika        ISSN： 0016-6758


  8 in total

Review 1.  Systems genetics, bioinformatics and eQTL mapping.

Authors:  Hong Li; Hongwen Deng
Journal:  Genetica       Date:  2010-09-03       Impact factor: 1.082

2.  A Brassica rapa linkage map of EST-based SNP markers for identification of candidate genes controlling flowering time and leaf morphological traits.

Authors:  Feng Li; Hiroyasu Kitashiba; Kiyofumi Inaba; Takeshi Nishio
Journal:  DNA Res       Date:  2009-11-02       Impact factor: 4.458

3.  Shrunken methodology to genome-wide SNPs selection and construction of SNPs networks.

Authors:  Yang Liu; Michael Ng
Journal:  BMC Syst Biol       Date:  2010-09-13

4.  Application of next-generation sequencing technology to study genetic diversity and identify unique SNP markers in bread wheat from Kazakhstan.

Authors:  Yuri Shavrukov; Radoslaw Suchecki; Serik Eliby; Aigul Abugalieva; Serik Kenebayev; Peter Langridge
Journal:  BMC Plant Biol       Date:  2014-09-28       Impact factor: 4.215

5.  Comparative analysis and implications of the chloroplast genomes of three thistles (Carduus L., Asteraceae).

Authors:  Joonhyung Jung; Hoang Dang Khoa Do; JongYoung Hyun; Changkyun Kim; Joo-Hwan Kim
Journal:  PeerJ       Date:  2021-01-14       Impact factor: 2.984

Review 6.  Exploring and exploiting genetics and genomics for sweetpotato improvement: Status and perspectives.

Authors:  Mengxiao Yan; Haozhen Nie; Yunze Wang; Xinyi Wang; Robert Jarret; Jiamin Zhao; Hongxia Wang; Jun Yang
Journal:  Plant Commun       Date:  2022-05-05

7.  Development of SLAF-Sequence and Multiplex SNaPshot Panels for Population Genetic Diversity Analysis and Construction of DNA Fingerprints for Sugarcane.

Authors:  Hui Zhang; Pingping Lin; Yanming Liu; Chaohua Huang; Guoqiang Huang; Hongtao Jiang; Liangnian Xu; Muqing Zhang; Zuhu Deng; Xinwang Zhao
Journal:  Genes (Basel)       Date:  2022-08-19       Impact factor: 4.141

8.  Genetic Diversity, Linkage Disequilibrium and Population Structure of Bulgarian Bread Wheat Assessed by Genome-Wide Distributed SNP Markers: From Old Germplasm to Semi-Dwarf Cultivars.

Authors:  Vladimir Aleksandrov; Tania Kartseva; Ahmad M Alqudah; Konstantina Kocheva; Krasimira Tasheva; Andreas Börner; Svetlana Misheva
Journal:  Plants (Basel)       Date:  2021-05-31
  8 in total

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