Literature DB >> 16866557

Genetically engineered synthesis and structural characterization of cobalt-precorrin 5A and -5B, two new intermediates on the anaerobic pathway to vitamin B12: definition of the roles of the CbiF and CbiG enzymes.

Yasuhiro Kajiwara1, Patricio J Santander, Charles A Roessner, Lisa M Pérez, A Ian Scott.   

Abstract

Two new cobalt corrinoid intermediates, cobalt-precorrin 5A and cobalt-precorrin 5B, have been synthesized with the aid of overexpressed enzymes of the vitamin B(12) pathway of Salmonella entericaserovar typhimurium. These compounds were made in several regioselectively (13)C-labeled forms, and their structures have been established by multidimensional NMR spectroscopy. The addition of CbiF to the enzymes known to synthesize cobalt-precorrin 4 resulted in the formation of cobalt-precorrin 5A, and the inclusion of CbiG with CbiF produced cobalt-precorrin 5B, which has allowed us to define the role of these enzymes in the anaerobic biosynthetic pathway. CbiF is the C-11 methylase, and CbiG, an enzyme which shows homology with CobE of the aerobic pathway, is the gene product responsible for the opening of the ring A delta-lactone and extrusion of the "C(2)" unit. The discovery of these long-sought intermediates paves the way for defining the final stages of the anaerobic pathway. It is of considerable evolutionary interest that nature uses two distinct pathways to vitamin B(12), both conserved over several billion years and featuring completely different mechanisms for ring-contraction of the porphyrinoid to the corrinoid ring system. Thus the aerobic pathway utilizes molecular oxygen to trigger the events at C-20 leading to contraction and expulsion of the "C(2)" unit as acetic acid from a metal-free intermediate, whereas the anaerobic route features internal delivery of oxygen from a carboxylic acid terminus to C-20 followed by extrusion of the "C(2)" unit as acetaldehyde, using cobalt complexes as substrates.

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Year:  2006        PMID: 16866557     DOI: 10.1021/ja062940a

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  9 in total

Review 1.  Fine-tuning our knowledge of the anaerobic route to cobalamin (vitamin B12).

Authors:  Charles A Roessner; A Ian Scott
Journal:  J Bacteriol       Date:  2006-08-25       Impact factor: 3.490

2.  Pathway engineered enzymatic de novo purine nucleotide synthesis.

Authors:  Heather L Schultheisz; Blair R Szymczyna; Lincoln G Scott; James R Williamson
Journal:  ACS Chem Biol       Date:  2008-08-15       Impact factor: 5.100

3.  Elucidation of the anaerobic pathway for the corrin component of cobalamin (vitamin B12).

Authors:  Simon J Moore; Andrew D Lawrence; Rebekka Biedendieck; Evelyne Deery; Stefanie Frank; Mark J Howard; Stephen E J Rigby; Martin J Warren
Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-06       Impact factor: 11.205

4.  A comparative genomics perspective on the genetic content of the alkaliphilic haloarchaeon Natrialba magadii ATCC 43099T.

Authors:  Shivakumara Siddaramappa; Jean F Challacombe; Rosana E Decastro; Friedhelm Pfeiffer; Diego E Sastre; María I Giménez; Roberto A Paggi; John C Detter; Karen W Davenport; Lynne A Goodwin; Nikos Kyrpides; Roxanne Tapia; Samuel Pitluck; Susan Lucas; Tanja Woyke; Julie A Maupin-Furlow
Journal:  BMC Genomics       Date:  2012-05-04       Impact factor: 3.969

5.  An enzymatic platform for the synthesis of isoprenoid precursors.

Authors:  Sofia B Rodriguez; Thomas S Leyh
Journal:  PLoS One       Date:  2014-08-25       Impact factor: 3.240

6.  Biosynthesis of Tetrapyrrole Cofactors by Bacterial Community Inhabiting Porphyrine-Containing Shale Rock (Fore-Sudetic Monocline).

Authors:  Robert Stasiuk; Tomasz Krucoń; Renata Matlakowska
Journal:  Molecules       Date:  2021-11-08       Impact factor: 4.411

7.  Crystal structure of putative CbiT from Methanocaldococcus jannaschii: an intermediate enzyme activity in cobalamin (vitamin B12) biosynthesis.

Authors:  Balasundaram Padmanabhan; Shigeyuki Yokoyama; Yoshitaka Bessho
Journal:  BMC Struct Biol       Date:  2013-05-20

Review 8.  Biosynthesis of the modified tetrapyrroles-the pigments of life.

Authors:  Donald A Bryant; C Neil Hunter; Martin J Warren
Journal:  J Biol Chem       Date:  2020-04-02       Impact factor: 5.157

9.  Open Issues for Protein Function Assignment in Haloferax volcanii and Other Halophilic Archaea.

Authors:  Friedhelm Pfeiffer; Mike Dyall-Smith
Journal:  Genes (Basel)       Date:  2021-06-24       Impact factor: 4.096

  9 in total

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