Literature DB >> 16861815

Simple identification of transgenic Arabidopsis plants carrying a single copy of the integrated gene.

Tomonori Kihara1, Cheng-Ri Zhao, Yuriko Kobayashi, Eiji Takita, Tetsu Kawazu, Hiroyuki Koyama.   

Abstract

Transgenic Arabidopsis thaliana plants carrying a single copy of integrated DNA can be identified by single-step genomic polymerase chain reaction. The reaction employs two sets of primer pairs with the same melting temperature that amplify the amplicons derived from the integrated T-DNA together with those from an endogenous single-copy gene as a reference. When the band intensity ratio is one, this means that the transgenic plants are carrying a single copy of the integrated gene per haploid.

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Year:  2006        PMID: 16861815     DOI: 10.1271/bbb.50687

Source DB:  PubMed          Journal:  Biosci Biotechnol Biochem        ISSN: 0916-8451            Impact factor:   2.043


  11 in total

1.  Scanning of transposable elements and analyzing expression of transposase genes of sweet potato [Ipomoea batatas].

Authors:  Lang Yan; Ying-Hong Gu; Xiang Tao; Xian-Jun Lai; Yi-Zheng Zhang; Xue-Mei Tan; Haiyan Wang
Journal:  PLoS One       Date:  2014-03-07       Impact factor: 3.240

2.  Characterization of AtSTOP1 orthologous genes in tobacco and other plant species.

Authors:  Yoshinao Ohyama; Hiroki Ito; Yuriko Kobayashi; Takashi Ikka; Akio Morita; Masatomo Kobayashi; Ryujiro Imaizumi; Toshio Aoki; Kenji Komatsu; Yoichi Sakata; Satoshi Iuchi; Hiroyuki Koyama
Journal:  Plant Physiol       Date:  2013-06-07       Impact factor: 8.340

3.  Overexpression of the A4-rolB gene from the pRiA4 of Rhizobium rhizogenes modulates hormones homeostasis and leads to an increase of flavonoid accumulation and drought tolerance in Arabidopsis thaliana transgenic plants.

Authors:  Galina N Veremeichik; Yuri N Shkryl; Tatiana V Rusapetova; Slavena A Silantieva; Valeria P Grigorchuk; Petr V Velansky; Evgenia V Brodovskaya; Yuliya A Konnova; Anastasia A Khopta; Dmitry V Bulgakov; Victor P Bulgakov
Journal:  Planta       Date:  2022-06-11       Impact factor: 4.116

4.  Identification of Gene Copy Number in the Transgenic Plants by Quantitative Polymerase Chain Reaction (qPCR).

Authors:  Poonam Kanwar; Soma Ghosh; Sibaji K Sanyal; Girdhar K Pandey
Journal:  Methods Mol Biol       Date:  2022

5.  In silico characterization, molecular phylogeny, and expression profiling of genes encoding legume lectin-like proteins under various abiotic stresses in Arabidopsis thaliana.

Authors:  Subhankar Biswas; Raju Mondal; Akanksha Srivastava; Maitri Trivedi; Sunil Kumar Singh; Yogesh Mishra
Journal:  BMC Genomics       Date:  2022-06-29       Impact factor: 4.547

6.  Heterologous Expression of Key C and N Metabolic Enzymes Improves Re-assimilation of Photorespired CO2 and NH3, and Growth.

Authors:  Anish Kaachra; Surender Kumar Vats; Sanjay Kumar
Journal:  Plant Physiol       Date:  2018-06-11       Impact factor: 8.340

7.  Extensive phenotypic variation among allelic T-DNA inserts in Arabidopsis thaliana.

Authors:  Megan E Valentine; Michael J Wolyniak; Matthew T Rutter
Journal:  PLoS One       Date:  2012-09-13       Impact factor: 3.240

8.  Identification of a new 130 bp cis-acting element in the TsVP1 promoter involved in the salt stress response from Thellungiella halophila.

Authors:  Qinghua Sun; Feng Gao; Lei Zhao; Kunpeng Li; Juren Zhang
Journal:  BMC Plant Biol       Date:  2010-05-18       Impact factor: 4.215

9.  Intronic T-DNA insertion in Arabidopsis NBR1 conditionally affects wild-type transcript level.

Authors:  Milagros Collados Rodríguez; Anna Wawrzyńska; Agnieszka Sirko
Journal:  Plant Signal Behav       Date:  2014

10.  Roles of JnRAP2.6-like from the transition zone of black walnut in hormone signaling.

Authors:  Zhonglian Huang; Peng Zhao; Jose Medina; Richard Meilan; Keith Woeste
Journal:  PLoS One       Date:  2013-11-12       Impact factor: 3.240

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