Literature DB >> 1686019

Genome mapping with anchored clones: theoretical aspects.

W J Ewens1, C J Bell, P J Donnelly, P Dunn, E Matallana, J R Ecker.   

Abstract

As part of our effort to construct a physical map of the genome of Arabidopsis thaliana we have made a mathematical analysis of our experimental approach of anchoring yeast artificial chromosome clones with genetically mapped RFLPs and RAPDs. The details of this analysis are presented and their implications for mapping the Arabidopsis genome are discussed.

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Year:  1991        PMID： 1686019     DOI： 10.1016/0888-7543(91)90003-w

Source DB:  PubMed          Journal:  Genomics        ISSN： 0888-7543            Impact factor:   5.736


  7 in total

1.  Generalized gap model for bacterial artificial chromosome clone fingerprint mapping and shotgun sequencing.

Authors:  Michael C Wendl; Robert H Waterston
Journal:  Genome Res       Date:  2002-12       Impact factor: 9.043

2.  Anchoring of a large set of markers onto a BAC library for the development of a draft physical map of the grapevine genome.

Authors:  Didier Lamoureux; Anne Bernole; Isabelle Le Clainche; Sarah Tual; Vincent Thareau; Sophie Paillard; Fabrice Legeai; Carole Dossat; Patrick Wincker; Marilyn Oswald; Didier Merdinoglu; Céline Vignault; Serge Delrot; Michel Caboche; Boulos Chalhoub; Anne-Françoise Adam-Blondon
Journal:  Theor Appl Genet       Date:  2006-05-18       Impact factor: 5.699

3.  Algorithms and software tools for ordering clone libraries: application to the mapping of the genome of Schizosaccharomyces pombe.

Authors:  R Mott; A Grigoriev; E Maier; J Hoheisel; H Lehrach
Journal:  Nucleic Acids Res       Date:  1993-04-25       Impact factor: 16.971

4.  Chromosome walking with YAC clones in Arabidopsis: isolation of 1700 kb of contiguous DNA on chromosome 5, including a 300 kb region containing the flowering-time gene CO.

Authors:  J Putterill; F Robson; K Lee; G Coupland
Journal:  Mol Gen Genet       Date:  1993-05

5.  Genomic mapping by single copy landmark detection: a predictive model with a discrete mathematical approach.

Authors:  T G Marr; X Yan; Q Yu
Journal:  Mamm Genome       Date:  1992       Impact factor: 2.957

6.  Global and local genome mapping in Arabidopsis thaliana by using recombinant inbred lines and random amplified polymorphic DNAs.

Authors:  R S Reiter; J G Williams; K A Feldmann; J A Rafalski; S V Tingey; P A Scolnik
Journal:  Proc Natl Acad Sci U S A       Date:  1992-02-15       Impact factor: 11.205

7.  Genome mapping by nonrandom anchoring: a discrete theoretical analysis.

Authors:  M Q Zhang; T G Marr
Journal:  Proc Natl Acad Sci U S A       Date:  1993-01-15       Impact factor: 11.205
  7 in total

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