Literature DB >> 16855302

Estimation of anomalous signal in diffraction data.

Zbigniew Dauter1.   

Abstract

It is difficult to judge objectively the amount and resolution limit of the anomalous signal present in diffraction data. While several criteria can be used for this purpose, the usefulness of these indicators varies and depends on factors such as the data redundancy, the accuracy of the estimation of intensities and their uncertainties, and the properties of the anomalously scattering atoms in the crystal. Various indicators give an approximate measure of the anomalous signal, but do not provide a reliable guarantee that the crystal structure will be solved. The ultimate criterion of the anomalous signal is a successful structure solution. The current data-acquisition and phasing methods are so advanced that it is often possible to phase reflections and obtain preliminary electron-density maps in a few minutes, while the crystal still resides at the experimental station and further data can be collected if necessary.

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Year:  2006        PMID: 16855302     DOI: 10.1107/S0907444906023481

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  17 in total

1.  Structure of the cytoplasmic domain of Yersinia pestis YscD, an essential component of the type III secretion system.

Authors:  George T Lountos; Joseph E Tropea; David S Waugh
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-02-07

2.  Multi-crystal anomalous diffraction for low-resolution macromolecular phasing.

Authors:  Qun Liu; Zhen Zhang; Wayne A Hendrickson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-12-16

3.  Structural studies on a non-toxic homologue of type II RIPs from bitter gourd: Molecular basis of non-toxicity, conformational selection and glycan structure.

Authors:  Thyageshwar Chandran; Alok Sharma; M Vijayan
Journal:  J Biosci       Date:  2015-12       Impact factor: 1.826

4.  Preliminary crystallographic analysis of Xyn52B2, a GH52 β-D-xylosidase from Geobacillus stearothermophilus T6.

Authors:  Roie Dann; Shifra Lansky; Noa Lavid; Arie Zehavi; Valery Belakhov; Timor Baasov; Hay Dvir; Babu Manjasetty; Hassan Belrhali; Yuval Shoham; Gil Shoham
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-11-28       Impact factor: 1.056

5.  Exploiting subtle structural differences in heavy-atom derivatives for experimental phasing.

Authors:  Jimin Wang; Yue Li; Yorgo Modis
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2014-06-29

6.  Multi-crystal native SAD analysis at 6 keV.

Authors:  Qun Liu; Youzhong Guo; Yanqi Chang; Zheng Cai; Zahra Assur; Filippo Mancia; Mark I Greene; Wayne A Hendrickson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2014-09-30

Review 7.  Contemporary Use of Anomalous Diffraction in Biomolecular Structure Analysis.

Authors:  Qun Liu; Wayne A Hendrickson
Journal:  Methods Mol Biol       Date:  2017

8.  Robust structural analysis of native biological macromolecules from multi-crystal anomalous diffraction data.

Authors:  Qun Liu; Qinglian Liu; Wayne A Hendrickson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-06-13

9.  The use of a mini-κ goniometer head in macromolecular crystallography diffraction experiments.

Authors:  Sandor Brockhauser; Raimond B G Ravelli; Andrew A McCarthy
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-06-15

10.  Optimal fine φ-slicing for single-photon-counting pixel detectors.

Authors:  Marcus Mueller; Meitian Wang; Clemens Schulze-Briese
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-12-09
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