| Literature DB >> 16848906 |
Hyungsuk Kim1, Hyewon Lee, Janet Rowan, Jaime Brahim, Raymond A Dionne.
Abstract
BACKGROUND: Candidate gene studies on the basis of biological hypotheses have been a practical approach to identify relevant genetic variation in complex traits. Based on previous reports and the roles in pain pathways, we have examined the effects of variations of loci in the genes of monoamine neurotransmitter systems including metabolizing enzymes, receptors and transporters on acute clinical pain responses in humans.Entities:
Mesh:
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Year: 2006 PMID: 16848906 PMCID: PMC1543620 DOI: 10.1186/1744-8069-2-24
Source DB: PubMed Journal: Mol Pain ISSN: 1744-8069 Impact factor: 3.395
Information of genotyped SNPs
| Gene | Order | SNP ID | Location from transcription site | Nucleotide variation | Rarer allele frequency |
| 1 | rs5746846 | -8,663 | G/C | 0.43 | |
| 2 | rs2020917 | -425 | C/T | 0.29 | |
| 3 | rs933271 | 2,099 | T/C | 0.29 | |
| 4 | rs5993882 | 8,225 | T/G | 0.25 | |
| 5 | rs740603 | 15,869 | G/A | 0.43 | |
| 6 | rs4646312 | 19,029 | T/C | 0.40 | |
| 7 | rs165722 | 19,705 | T/C | 0.45 | |
| 8 | rs6269 | 20,644 | A/G | 0.40 | |
| 9 | rs4633 | 20,927 | T/C | 0.46 | |
| 10 | rs4818 | 21,899 | C/G | 0.41 | |
| 11 | rs4680 | 21,963 | A/G | 0.46 | |
| 12 | rs174699 | 25,150 | T/C | 0.03 | |
| 13 | rs165728 | 27,715 | T/C | 0.04 | |
| 1 | rs3788862 | 1,956 | A/G | 0.34 | |
| 2 | rs909525 | 37,794 | T/C | 0.38 | |
| 3 | rs2283274 | 44,168 | A/G | 0.38 | |
| 4 | rs1800659 | 58,761 | A/G | 0.33 | |
| 5 | rs979606 | 85,734 | T/C | 0.33 | |
| 6 | rs979605 | 85,955 | G/A | 0.33 | |
| 7 | 87,983 | C/T | 0.34 | ||
| 8 | rs2064070 | 93,274 | T/A | 0.36 | |
| 1 | rs2283729 | 63,640 | C/T | 0.28 | |
| 2 | rs3027452 | 83,893 | C/T | 0.20 | |
| 3 | rs1799836 | 113,683 | G/A | 0.47 | |
| 1 | 7,551 | C/T | 0.06 | ||
| 2 | rs40434 | 8,968 | A/G | 0.41 | |
| 3 | rs36017 | 28,261 | G/C | 0.49 | |
| 1 | rs6350 | 2,347 | C/T | 0.09 | |
| 2 | rs403636 | 7,192 | G/T | 0.14 | |
| 3 | rs40184 | 50,469 | G/A | 0.41 | |
| 4 | rs12516948 | 54,177 | T/C | 0.35 | |
| 5 | rs10064219 | 60,548 | C/T | 0.14 | |
| 1 | rs2066713 | 10,852 | C/T | 0.38 | |
| 2 | 22,674 | G/A | 0.01 | ||
| 3 | rs140701 | 24,184 | G/A | 0.45 | |
| 4 | rs4325622 | 36,247 | A/G | 0.49 | |
| 5 | rs1979572 | 50,741 | C/T | 0.48 | |
| 1 | rs12421616 | 8,105 | G/A | 0.12 | |
| 2 | rs4322431 | 12,929 | A/T | 0.26 | |
| 3 | rs4581480 | 21,411 | A/G | 0.13 | |
| 4 | rs4936272 | 26,977 | G/A | 0.46 | |
| 5 | rs4648318 | 32,495 | A/G | 0.29 | |
| 6 | rs11608185 | 51,187 | G/A | 0.49 | |
| 7 | rs2734837 | 59,336 | A/G | 0.47 | |
| 8 | rs6277 | 62,706 | T/C | 0.46 | |
| 9 | rs6279 | 65,092 | G/C | 0.28 |
Figure 1Maximum post-operative pain ratings and SNPs from COMT and MAOA. COMT: catechol O-methylatransferase gene MAOA: monoamine oxidase A gene, females only *, p < 0.05 **, p < 0.01
Figure 2Time dependant pain responses and monoamine neurotransmitter transporter SNPs. C6A2: norepinephrine transporter gene SLC6A4: serotonin transporter gene *, p < 0.05