Literature DB >> 16847138

Orchid fleck virus is a rhabdovirus with an unusual bipartite genome.

Hideki Kondo1, Takanori Maeda, Yukio Shirako, Tetsuo Tamada.   

Abstract

Orchid fleck virus (OFV) has an unusual bipartite negative-sense RNA genome with clear sequence similarities to those of nucleorhabdoviruses. The OFV genome consists of two single-stranded RNA molecules, RNA1 and RNA2 that are 6413 and 6001 nt long, respectively, with open reading frame (ORF) information in the complementary sense. RNA1 encodes 49 (ORF1), 26 (ORF2), 38 (ORF3), 20 (ORF4) and 61 kDa (ORF5) proteins, and RNA2 encodes a single protein of 212 kDa (ORF6). ORF1, ORF5 and ORF6 proteins had significant similarities (21-38 % identity) to the nucleocapsid protein (N), glycoprotein (G) and polymerase (L) gene products, respectively, of other rhabdoviruses, especially nucleorhabdoviruses, whereas ORF2, ORF3 and ORF4 proteins had no significant similarities to other proteins in the international databases. Similarities between OFV and rhabdoviruses were also found in the sequence complementarity at both termini of each RNA segment (the common terminal sequences are 3'-UGUGUC---GACACA-5'), the conserved intergenic sequences and in being negative sense. It was proposed that a new genus Dichorhabdovirus in the family Rhabdoviridae of the order Mononegavirales should be established with OFV as its prototype member and type species.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16847138     DOI: 10.1099/vir.0.81811-0

Source DB:  PubMed          Journal:  J Gen Virol        ISSN: 0022-1317            Impact factor:   3.891


  13 in total

1.  Application of broad-spectrum resequencing microarray for genotyping rhabdoviruses.

Authors:  Laurent Dacheux; Nicolas Berthet; Gabriel Dissard; Edward C Holmes; Olivier Delmas; Florence Larrous; Ghislaine Guigon; Philip Dickinson; Ousmane Faye; Amadou A Sall; Iain G Old; Katherine Kong; Giulia C Kennedy; Jean-Claude Manuguerra; Stewart T Cole; Valérie Caro; Antoine Gessain; Hervé Bourhy
Journal:  J Virol       Date:  2010-07-07       Impact factor: 5.103

2.  Characterization of Durham virus, a novel rhabdovirus that encodes both a C and SH protein.

Authors:  A B Allison; G Palacios; A Travassos da Rosa; V L Popov; L Lu; S Y Xiao; K DeToy; T Briese; W I Lipkin; M K Keel; D E Stallknecht; G R Bishop; R B Tesh
Journal:  Virus Res       Date:  2010-09-21       Impact factor: 3.303

3.  Detection of Brevipalpus-transmitted viruses in their mite vectors by RT-PCR.

Authors:  K S Kubo; V M Novelli; M Bastianel; E C Locali-Fabris; R Antonioli-Luizon; M A Machado; J Freitas-Astúa
Journal:  Exp Appl Acarol       Date:  2011-01-29       Impact factor: 2.132

Review 4.  The family Rhabdoviridae: mono- and bipartite negative-sense RNA viruses with diverse genome organization and common evolutionary origins.

Authors:  Ralf G Dietzgen; Hideki Kondo; Michael M Goodin; Gael Kurath; Nikos Vasilakis
Journal:  Virus Res       Date:  2016-10-20       Impact factor: 3.303

5.  Fungal negative-stranded RNA virus that is related to bornaviruses and nyaviruses.

Authors:  Lijiang Liu; Jiatao Xie; Jiasen Cheng; Yanping Fu; Guoqing Li; Xianhong Yi; Daohong Jiang
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-04       Impact factor: 11.205

6.  Orchid fleck virus structural proteins N and P form intranuclear viroplasm-like structures in the absence of viral infection.

Authors:  Hideki Kondo; Sotaro Chiba; Ida Bagus Andika; Kazuyuki Maruyama; Tetsuo Tamada; Nobuhiro Suzuki
Journal:  J Virol       Date:  2013-04-24       Impact factor: 5.103

7.  Widespread endogenization of genome sequences of non-retroviral RNA viruses into plant genomes.

Authors:  Sotaro Chiba; Hideki Kondo; Akio Tani; Daisuke Saisho; Wataru Sakamoto; Satoko Kanematsu; Nobuhiro Suzuki
Journal:  PLoS Pathog       Date:  2011-07-14       Impact factor: 6.823

8.  Genome assembly of citrus leprosis virus nuclear type reveals a close association with orchid fleck virus.

Authors:  Avijit Roy; Andrew Stone; Gabriel Otero-Colina; Gang Wei; Nandlal Choudhary; Diann Achor; Jonathan Shao; Laurene Levy; Mark K Nakhla; Charla R Hollingsworth; John S Hartung; William L Schneider; Ronald H Brlansky
Journal:  Genome Announc       Date:  2013-07-25

9.  Rice Stripe Mosaic Virus, a Novel Cytorhabdovirus Infecting Rice via Leafhopper Transmission.

Authors:  Xin Yang; Jilei Huang; Chuanhe Liu; Biao Chen; Tong Zhang; Guohui Zhou
Journal:  Front Microbiol       Date:  2017-01-04       Impact factor: 5.640

10.  Characterization of a proposed dichorhavirus associated with the citrus leprosis disease and analysis of the host response.

Authors:  José Luis Cruz-Jaramillo; Roberto Ruiz-Medrano; Lourdes Rojas-Morales; José Abel López-Buenfil; Oscar Morales-Galván; Claudio Chavarín-Palacio; José Abrahán Ramírez-Pool; Beatriz Xoconostle-Cázares
Journal:  Viruses       Date:  2014-07-07       Impact factor: 5.048

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.