Literature DB >> 16846647

StdpC: a modern dynamic clamp.

Thomas Nowotny1, Attila Szucs, Reynaldo D Pinto, Allen I Selverston.   

Abstract

With the advancement of computer technology many novel uses of dynamic clamp have become possible. We have added new features to our dynamic clamp software StdpC ("Spike timing-dependent plasticity Clamp") allowing such new applications while conserving the ease of use and installation of the popular earlier Dynclamp 2/4 package. Here, we introduce the new features of a waveform generator, freely programmable Hodgkin-Huxley conductances, learning synapses, graphic data displays, and a powerful scripting mechanism and discuss examples of experiments using these features. In the first example we built and 'voltage clamped' a conductance based model cell from a passive resistor-capacitor (RC) circuit using the dynamic clamp software to generate the voltage-dependent currents. In the second example we coupled our new spike generator through a burst detection/burst generation mechanism in a phase-dependent way to a neuron in a central pattern generator and dissected the subtle interaction between neurons, which seems to implement an information transfer through intraburst spike patterns. In the third example, making use of the new plasticity mechanism for simulated synapses, we analyzed the effect of spike timing-dependent plasticity (STDP) on synchronization revealing considerable enhancement of the entrainment of a post-synaptic neuron by a periodic spike train. These examples illustrate that with modern dynamic clamp software like StdpC, the dynamic clamp has developed beyond the mere introduction of artificial synapses or ionic conductances into neurons to a universal research tool, which might well become a standard instrument of modern electrophysiology.

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Year:  2006        PMID: 16846647     DOI: 10.1016/j.jneumeth.2006.05.034

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  22 in total

1.  Engineering the synchronization of neuron action potentials using global time-delayed feedback stimulation.

Authors:  Craig G Rusin; Sarah E Johnson; Jaideep Kapur; John L Hudson
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-12-06

2.  Effects of imperfect dynamic clamp: computational and experimental results.

Authors:  Jonathan C Bettencourt; Kyle P Lillis; Laura R Stupin; John A White
Journal:  J Neurosci Methods       Date:  2007-10-24       Impact factor: 2.390

3.  Artificial synaptic modification reveals a dynamical invariant in the pyloric CPG.

Authors:  Marcelo B Reyes; Ramón Huerta; Mikhail I Rabinovich; Allen I Selverston
Journal:  Eur J Appl Physiol       Date:  2007-12-13       Impact factor: 3.078

4.  Neuronal synchrony: peculiarity and generality.

Authors:  Thomas Nowotny; Ramon Huerta; Mikhail I Rabinovich
Journal:  Chaos       Date:  2008-09       Impact factor: 3.642

5.  Dynamics of a Mutual Inhibition Circuit between Pyramidal Neurons Compared to Human Perceptual Competition.

Authors:  Naoki Kogo; Felix B Kern; Thomas Nowotny; Raymond van Ee; Richard van Wezel; Takeshi Aihara
Journal:  J Neurosci       Date:  2020-12-22       Impact factor: 6.167

6.  Differential effects of static and dynamic inputs on neuronal excitability.

Authors:  Attila Szücs; Ramon Huerta
Journal:  J Neurophysiol       Date:  2014-10-01       Impact factor: 2.714

7.  Frequency-dependent regulation of intrinsic excitability by voltage-activated membrane conductances, computational modeling and dynamic clamp.

Authors:  Attila Szűcs; Anikó Rátkai; Katalin Schlett; Ramon Huerta
Journal:  Eur J Neurosci       Date:  2017-10-13       Impact factor: 3.386

8.  Consistency and diversity of spike dynamics in the neurons of bed nucleus of stria terminalis of the rat: a dynamic clamp study.

Authors:  Attila Szücs; Fulvia Berton; Thomas Nowotny; Pietro Sanna; Walter Francesconi
Journal:  PLoS One       Date:  2010-08-03       Impact factor: 3.240

9.  NeuReal: an interactive simulation system for implementing artificial dendrites and large hybrid networks.

Authors:  Stuart W Hughes; Magor Lorincz; David W Cope; Vincenzo Crunelli
Journal:  J Neurosci Methods       Date:  2007-11-01       Impact factor: 2.390

10.  Reduced intrinsic excitability of CA1 pyramidal neurons in human immunodeficiency virus (HIV) transgenic rats.

Authors:  Irina V Sokolova; Attila Szucs; Pietro Paolo Sanna
Journal:  Brain Res       Date:  2019-09-03       Impact factor: 3.252

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