Literature DB >> 16845168

A hybrid approach to shape-based interpolation of stereotactic atlases of the human brain.

Jimin Liu1, Wieslaw L Nowinski.   

Abstract

Stereotactic human brain atlases, either in print or electronic form, are useful not only in functional neurosurgery, but also in neuroradiology, human brain mapping, and neuroscience education. The existing atlases represent structures on 2D plates taken at variable, often large intervals, which limit their applications. To overcome this problem, we propose a hybrid interpolation approach to build high-resolution brain atlases from the existing ones. In this approach, all section regions of each object are grouped into two types of components: simple and complex. A NURBS-based method is designed for interpolation of the simple components, and a distance map-based method for the complex components. Once all individual objects in the atlas are interpolated, the results are combined hierarchically in a bottom-up manner to produce the interpolation of the entire atlas. In the procedure, different knowledge-based and heuristic strategies are used to preserve various topological relationships. The proposed approach has been validated quantitatively and used for interpolation of two stereotactic brain atlases: the Talairach-Tournoux atlas and Schaltenbrand-Wahren atlas. The interpolations produced are of high resolution and feature high accuracy, 3D consistency, smooth surface, and preserved topology. They potentially open new applications for electronic stereotactic brain atlases, such as atlas reformatting, accurate 3D display, and 3D nonlinear warping against normal and pathological scans. The proposed approach is also potentially useful in other applications, which require interpolation and 3D modeling from sparse and/or variable intersection interval data. An example of 3D modeling of an infarct from MR diffusion images is presented.

Entities:  

Mesh:

Year:  2006        PMID: 16845168     DOI: 10.1385/NI:4:2:177

Source DB:  PubMed          Journal:  Neuroinformatics        ISSN: 1539-2791


  13 in total

1.  Atlas-assisted localization analysis of functional images.

Authors:  W L Nowinski; A Thirunavuukarasuu
Journal:  Med Image Anal       Date:  2001-09       Impact factor: 8.545

2.  Feature-guided shape-based image interpolation.

Authors:  Tong-Yee Lee; Chao-Hung Lin
Journal:  IEEE Trans Med Imaging       Date:  2002-12       Impact factor: 10.048

3.  Integrating databases and expert systems for the analysis of brain structures: connections, similarities, and homologies.

Authors:  Mihail Bota; Michael A Arbib
Journal:  Neuroinformatics       Date:  2004

4.  Text mining neuroscience journal articles to populate neuroscience databases.

Authors:  Chiquito J Crasto; Luis N Marenco; Michele Migliore; Buqing Mao; Prakash M Nadkarni; Perry Miller; Gordon M Shepherd
Journal:  Neuroinformatics       Date:  2003

5.  NeuroNames 2002.

Authors:  Douglas M Bowden; Mark F Dubach
Journal:  Neuroinformatics       Date:  2003

6.  Tools and approaches for the construction of knowledge models from the neuroscientific literature.

Authors:  Gully A P C Burns; Arshad M Khan; Shahram Ghandeharizadeh; Mark A O'Neill; Yi-Shin Chen
Journal:  Neuroinformatics       Date:  2003

Review 7.  The cerefy brain atlases: continuous enhancement of the electronic talairach-tournoux brain atlas.

Authors:  Wieslaw L Nowinski
Journal:  Neuroinformatics       Date:  2005

8.  Shape-based interpolation of multidimensional objects.

Authors:  S P Raya; J K Udupa
Journal:  IEEE Trans Med Imaging       Date:  1990       Impact factor: 10.048

9.  Morphology-based interpolation for 3D medical image reconstruction.

Authors:  J F Guo; Y L Cai; Y P Wang
Journal:  Comput Med Imaging Graph       Date:  1995 May-Jun       Impact factor: 4.790

10.  Multiple brain atlas database and atlas-based neuroimaging system.

Authors:  W L Nowinski; A Fang; B T Nguyen; J K Raphel; L Jagannathan; R Raghavan; R N Bryan; G A Miller
Journal:  Comput Aided Surg       Date:  1997
View more
  4 in total

1.  Research on interpolation methods in medical image processing.

Authors:  Mei-Sen Pan; Xiao-Li Yang; Jing-Tian Tang
Journal:  J Med Syst       Date:  2010-07-06       Impact factor: 4.460

2.  Automatic segmentation of the human brain ventricles from MR images by knowledge-based region growing and trimming.

Authors:  Jimin Liu; Su Huang; Wieslaw L Nowinski
Journal:  Neuroinformatics       Date:  2009-05-16

3.  3D segmentation and quantification of a masticatory muscle from MR data using patient-specific models and matching distributions.

Authors:  H P Ng; S H Ong; J Liu; S Huang; K W C Foong; P S Goh; W L Nowinski
Journal:  J Digit Imaging       Date:  2008-05-31       Impact factor: 4.056

4.  Voronoi analysis uncovers relationship between mosaics of normally placed and displaced amacrine cells in the thraira retina.

Authors:  Luciano Da Fontoura Costa; Daniela Maria Oliveira Bonci; Cézar Akiyoshi Saito; Fernando Allan De Farias Rocha; Luiz Carlos De Lima Silveira; Dora Fix Ventura
Journal:  Neuroinformatics       Date:  2007
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.