Literature DB >> 16845127

Probing conserved amino acids in phospholipase D (Brassica oleracea var. capitata) for their importance in hydrolysis and transphosphatidylation activity.

Alexandra Lerchner1, Johanna Mansfeld, Konstantin Kuppe, Renate Ulbrich-Hofmann.   

Abstract

In addition to hydrolysis of glycerophospholipids, phospholipases D (PLDs) catalyze the head group exchange. The molecular basis of this transphosphatidylation potential, which strongly varies for PLDs from different sources, is unknown hitherto. Recently, the genes of two PLD isoenzymes from white cabbage have been sequenced and expressed in Escherchia coli, yielding the basis for mutational studies. In the present paper, three sequence characteristics of the isoenzyme (PLD2) that corresponds to the often used enzyme isolated from cabbage leaves have been probed for their importance in hydrolysis as well as transphosphatidylation activities: (i) the two HKD motifs, (ii) the C terminus and (iii) the eight cysteine residues. All these regions or amino acids are highly conserved in alpha-type plant PLDs. Based on multiple alignments, predictions of secondary structure and comparisons of hydrophobicity profiles, 35 enzyme variants were created and assayed. All positions tested proved to be very sensitive towards amino acid exchanges with respect to hydrolytic activity in the absence of glycerol as well as to the ratio of hydrolytic and transphosphatidylation activities in the presence of glycerol. A significant increase of total activity and transphosphatidylation activity could be obtained by the substitutions C310S and C625S.

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Year:  2006        PMID: 16845127     DOI: 10.1093/protein/gzl028

Source DB:  PubMed          Journal:  Protein Eng Des Sel        ISSN: 1741-0126            Impact factor:   1.650


  5 in total

1.  Genetic basis for daptomycin resistance in enterococci.

Authors:  Kelli L Palmer; Anu Daniel; Crystal Hardy; Jared Silverman; Michael S Gilmore
Journal:  Antimicrob Agents Chemother       Date:  2011-04-18       Impact factor: 5.191

2.  Human PLD structures enable drug design and characterization of isoenzyme selectivity.

Authors:  Claire M Metrick; Emily A Peterson; Joseph C Santoro; Istvan J Enyedy; Paramasivam Murugan; TeYu Chen; Klaus Michelsen; Michael Cullivan; Kerri A Spilker; P Rajesh Kumar; Tricia L May-Dracka; Jayanth V Chodaparambil
Journal:  Nat Chem Biol       Date:  2020-02-10       Impact factor: 15.040

3.  Arabidopsis phospholipase dδ is involved in basal defense and nonhost resistance to powdery mildew fungi.

Authors:  Francesco Pinosa; Nathalie Buhot; Mark Kwaaitaal; Per Fahlberg; Hans Thordal-Christensen; Mats Ellerström; Mats X Andersson
Journal:  Plant Physiol       Date:  2013-08-26       Impact factor: 8.340

Review 4.  Structure and regulation of human phospholipase D.

Authors:  Forrest Z Bowling; Michael A Frohman; Michael V Airola
Journal:  Adv Biol Regul       Date:  2021-01-03

5.  Structural insights into PA3488-mediated inactivation of Pseudomonas aeruginosa PldA.

Authors:  Xiaoyun Yang; Zongqiang Li; Liang Zhao; Zhun She; Zengqiang Gao; Sen-Fang Sui; Yuhui Dong; Yanhua Li
Journal:  Nat Commun       Date:  2022-10-10       Impact factor: 17.694

  5 in total

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