Literature DB >> 16839033

Characterization of a closed-shell fluorine-fluorine bonding interaction in aromatic compounds on the basis of the electron density.

Chérif F Matta1, Norberto Castillo, Russell J Boyd.   

Abstract

A bond path linking two saturated fluorine atoms is found to be ubiquitous in crowded difluorinated aromatic compounds. The bond path is shown to persist for a range of internuclear distances (2.3-2.8 A) and a range of relative orientations of the two C-F internuclear axes. The F. . .F bonding is shown to exhibit all the hallmarks of a closed-shell weak interaction. The presence of such a bond path can impart as much as 14 kcal/mol of local stabilization to the molecule in which it exists, a stabilization that can be offset or even overwhelmed by destabilization of other regions in the molecule. Several other weak closed-shell interactions were also found and characterized including F. . .C, F. . .O, and C. . .C interactions, hydrogen bonding, dihydrogen bonding, and hydrogen-hydrogen bonding. This study represents another example of the usefulness and richness of the bond path concept and of the theory of atoms in molecules in general.

Entities:  

Year:  2005        PMID: 16839033     DOI: 10.1021/jp045044z

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  12 in total

1.  Characterization of PDZ domain-peptide interactions using an integrated protocol of QM/MM, PB/SA, and CFEA analyses.

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Journal:  J Comput Aided Mol Des       Date:  2011-10-01       Impact factor: 3.686

2.  Fluorine bonding enhances the energetics of protein-lipid binding in the gas phase.

Authors:  Lan Liu; Nobar Jalili; Alyson Baergen; Simon Ng; Justin Bailey; Ratmir Derda; John S Klassen
Journal:  J Am Soc Mass Spectrom       Date:  2014-05       Impact factor: 3.109

3.  Theoretical study of the complementarity in halogen-bonded complexes involving nitrogen and halogen as negative sites.

Authors:  Mehdi D Esrafili; Mahshad Vakili; Mohammad Solimannejad
Journal:  J Mol Model       Date:  2014-02-13       Impact factor: 1.810

4.  Determining Repulsion in Cyclophane Cages.

Authors:  Mirosław Jabłoński
Journal:  Molecules       Date:  2022-06-21       Impact factor: 4.927

5.  Synthesis and Structure Elucidation of Novel Spirooxindole Linked to Ferrocene and Triazole Systems via [3 + 2] Cycloaddition Reaction.

Authors:  Mezna Saleh Altowyan; Saied M Soliman; Matti Haukka; Nora Hamad Al-Shaalan; Aminah A Alkharboush; Assem Barakat
Journal:  Molecules       Date:  2022-06-25       Impact factor: 4.927

6.  Characterization of halogen···halogen interactions in crystalline dihalomethane compounds (CH2Cl2, CH2Br2 and CH2I2): a theoretical study.

Authors:  Mehdi D Esrafili; Mahshad Vakili; Mohammad Solimannejad
Journal:  J Mol Model       Date:  2014-02-11       Impact factor: 1.810

7.  Combined QTAIM and ETS-NOCV investigation of the interactions in ClnM[PhB(NtBu)2] complexes with M = Si & Ge (n = 0), As & Sb (n = 1), Te & Po (n = 2).

Authors:  Salima Lakehal; Aicha Lakehal; Malika Bouchagour; Christophe Morell; Henry Chermette
Journal:  J Mol Model       Date:  2018-10-29       Impact factor: 1.810

8.  Computational evidence for intramolecular hydrogen bonding and nonbonding X···O interactions in 2'-haloflavonols.

Authors:  Tânia A O Fonseca; Matheus P Freitas; Rodrigo A Cormanich; Teodorico C Ramalho; Cláudio F Tormena; Roberto Rittner
Journal:  Beilstein J Org Chem       Date:  2012-01-19       Impact factor: 2.883

9.  A heuristic approach to evaluate peri interactions versus intermolecular interactions in an overcrowded naphthalene.

Authors:  Sounak Sarkar; Tayur N Guru Row
Journal:  IUCrJ       Date:  2017-01-01       Impact factor: 4.769

10.  Theoretical Study of Intramolecular Interactions in Peri-Substituted Naphthalenes: Chalcogen and Hydrogen Bonds.

Authors:  Goar Sánchez-Sanz; Ibon Alkorta; José Elguero
Journal:  Molecules       Date:  2017-02-02       Impact factor: 4.411

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