Literature DB >> 16838988

Ar-matrix IR spectra of 5-halouracils interpreted by means of DFT calculations.

Jan Cz Dobrowolski1, Joanna E Rode, Robert Kołos, Michał H Jamróz, Krzysztof Bajdor, Aleksander P Mazurek.   

Abstract

The infrared low-temperature Ar-matrix spectra of 5-halouracils and unsubstituted uracil were measured and interpreted in terms of the spectra calculated at the DFT/B3PW91/6-311G level followed by a potential energy distribution (PED) analysis. For the PED analysis, the sets of halouracil mode definitions were constructed so that dissimilarities in the interpretations of the different spectra were minimized. Anharmonic frequency calculations enabled more light to be shed on the Fermi resonance (FR) phenomena occurring in the nu(C=O) stretching vibrations region. For each halouracil vibrational spectrum, several FRs manifest themselves in the nu(C=O) stretching vibrations region. We show that the most frequent components participating in these resonances are the nu(C(4)=O(10)) frequency, a beta(N-H) mode frequency, and a beta(C=O) mode frequency. The experimental nu(N-H) frequencies are reproduced by the calculated anharmonic frequencies better than by the scaled harmonic ones, and the nu(C=O) frequencies respond in the opposite manner. The experimental frequencies located below 1500 cm(-1) are reproduced equally well by the two kinds of calculations.

Entities:  

Year:  2005        PMID: 16838988     DOI: 10.1021/jp045213f

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  2 in total

1.  Prediction of accurate anharmonic experimental vibrational frequencies for water clusters, (H2O)n, n=2-5.

Authors:  Meghan E Dunn; Timothy M Evans; Karl N Kirschner; George C Shields
Journal:  J Phys Chem A       Date:  2006-01-12       Impact factor: 2.781

2.  Factors Governing the Chemical Stability and NMR Parameters of Uracil Tautomers and Its 5-Halogen Derivatives.

Authors:  Kacper Rzepiela; Aneta Buczek; Teobald Kupka; Małgorzata A Broda
Journal:  Molecules       Date:  2020-08-28       Impact factor: 4.411

  2 in total

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