Literature DB >> 16838855

Comprehensive search for DNA polymerase in the hyperthermophilic archaeon, Pyrococcus furiosus.

Sonoko Ishino1, Yoshizumi Ishino.   

Abstract

DNA polymerase activities were scanned in a Pyrococcus furiosus cell extract to identify all of the DNA polymerases in this organism. Three main fractions containingDNA polymerizing activity were subjected to Western blot analyses, which revealed that the main activities in each fraction were derived from three previously identified DNA polymerases. PCNA (proliferating cell nuclear antigen), the sliding clamp of DNA polymerases, did not bind tightly to any of the three DNA polymerases. A primer usage preference was also shown for each purified DNA polymerase. Considering their biochemical properties, the roles of the three DNA polymerases during DNA replication in the cells are discussed.

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Year:  2006        PMID: 16838855     DOI: 10.1080/15257770600686485

Source DB:  PubMed          Journal:  Nucleosides Nucleotides Nucleic Acids        ISSN: 1525-7770            Impact factor:   1.381


  8 in total

1.  Archaeal replicative primases can perform translesion DNA synthesis.

Authors:  Stanislaw K Jozwiakowski; Farimah Borazjani Gholami; Aidan J Doherty
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-02       Impact factor: 11.205

2.  Elucidating functions of DP1 and DP2 subunits from the Thermococcus kodakarensis family D DNA polymerase.

Authors:  Natsuki Takashima; Sonoko Ishino; Keisuke Oki; Mika Takafuji; Takeshi Yamagami; Ryotaro Matsuo; Kouta Mayanagi; Yoshizumi Ishino
Journal:  Extremophiles       Date:  2018-11-30       Impact factor: 2.395

3.  PCNA is involved in the EndoQ-mediated DNA repair process in Thermococcales.

Authors:  Miyako Shiraishi; Sonoko Ishino; Kotaro Yoshida; Takeshi Yamagami; Isaac Cann; Yoshizumi Ishino
Journal:  Sci Rep       Date:  2016-05-06       Impact factor: 4.379

4.  Pol B, a Family B DNA Polymerase, in Thermococcus kodakarensis is Important for DNA Repair, but not DNA Replication.

Authors:  Takashi Kushida; Issay Narumi; Sonoko Ishino; Yoshizumi Ishino; Shinsuke Fujiwara; Tadayuki Imanaka; Hiroki Higashibata
Journal:  Microbes Environ       Date:  2019-07-27       Impact factor: 2.912

5.  Biochemical properties and base excision repair complex formation of apurinic/apyrimidinic endonuclease from Pyrococcus furiosus.

Authors:  Shinichi Kiyonari; Saki Tahara; Tsuyoshi Shirai; Shigenori Iwai; Sonoko Ishino; Yoshizumi Ishino
Journal:  Nucleic Acids Res       Date:  2009-09-04       Impact factor: 16.971

6.  Genomic context analysis in Archaea suggests previously unrecognized links between DNA replication and translation.

Authors:  Jonathan Berthon; Diego Cortez; Patrick Forterre
Journal:  Genome Biol       Date:  2008-04-09       Impact factor: 13.583

7.  Role of RadA and DNA Polymerases in Recombination-Associated DNA Synthesis in Hyperthermophilic Archaea.

Authors:  Gaëlle Hogrel; Yang Lu; Nicolas Alexandre; Audrey Bossé; Rémi Dulermo; Sonoko Ishino; Yoshizumi Ishino; Didier Flament
Journal:  Biomolecules       Date:  2020-07-14

8.  Two conformations of DNA polymerase D-PCNA-DNA, an archaeal replisome complex, revealed by cryo-electron microscopy.

Authors:  Kouta Mayanagi; Keisuke Oki; Naoyuki Miyazaki; Sonoko Ishino; Takeshi Yamagami; Kosuke Morikawa; Kenji Iwasaki; Daisuke Kohda; Tsuyoshi Shirai; Yoshizumi Ishino
Journal:  BMC Biol       Date:  2020-10-28       Impact factor: 7.431

  8 in total

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