Literature DB >> 16833770

Databases for transition element bonding: metal-metal bond energies and bond lengths and their use to test hybrid, hybrid meta, and meta density functionals and generalized gradient approximations.

Nathan E Schultz1, Yan Zhao, Donald G Truhlar.   

Abstract

We propose a data set of bond lengths for 8 selected transition metal dimers (Ag(2), Cr(2), Cu(2), CuAg, Mo(2), Ni(2), V(2), and Zr(2)) and another data set containing their atomization energies and the atomization energy of ZrV, and we use these for testing density functional theory. The molecules chosen for the test sets were selected on the basis of the expected reliability of the data and their ability to constitute a diverse and representative set of transition element bond types while the data sets are kept small enough to allow for efficient testing of a large number of computational methods against a very reliable subset of experimental data. In this paper we test 42 different functionals: 2 local spin density approximation (LSDA) functionals, 12 generalized gradient approximation (GGA) methods, 13 hybrid GGAs, 7 meta GGA methods, and 8 hybrid meta GGAs. We find that GGA density functionals are more accurate for the atomization energies of pure transition metal systems than are their meta, hybrid, or hybrid meta analogues. We find that the errors for atomization energies and bond lengths are not as large if we limit ourselves to dimers with small amounts of multireference character. We also demonstrate the effects of increasing the fraction of Hartree-Fock exchange in multireference systems by computing the potential energy curve for Cr(2) and Mo(2) with several functionals. We also find that BLYP is the most accurate functional for bond energies and is reasonably accurate for bond lengths. The methods that work well for transition metal bonds are found to be quite different from those that work well for organic and other main group chemistry.

Entities:  

Year:  2005        PMID: 16833770     DOI: 10.1021/jp0504468

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  11 in total

1.  Structure, redox, pKa, spin. A golden tetrad for understanding metalloenzyme energetics and reaction pathways.

Authors:  Louis Noodleman; Wen-Ge Han
Journal:  J Biol Inorg Chem       Date:  2006-07-08       Impact factor: 3.358

2.  Density functional localized orbital corrections for transition metals.

Authors:  David Rinaldo; Li Tian; Jeremy N Harvey; Richard A Friesner
Journal:  J Chem Phys       Date:  2008-10-28       Impact factor: 3.488

Review 3.  Metal Ion Modeling Using Classical Mechanics.

Authors:  Pengfei Li; Kenneth M Merz
Journal:  Chem Rev       Date:  2017-01-03       Impact factor: 60.622

4.  Role of size and shape selectivity in interaction between gold nanoclusters and imidazole: a theoretical study.

Authors:  Muthuramalingam Prakash; Gilberte Chambaud; M Mogren Al-Mogren; Majdi Hochlaf
Journal:  J Mol Model       Date:  2014-12-09       Impact factor: 1.810

5.  Revised M06-L functional for improved accuracy on chemical reaction barrier heights, noncovalent interactions, and solid-state physics.

Authors:  Ying Wang; Xinsheng Jin; Haoyu S Yu; Donald G Truhlar; Xiao He
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-24       Impact factor: 11.205

6.  The redox potential of flavin derivatives as a mediator in biosensors.

Authors:  A H Pakiari; M Salarhaji; T Abdollahi; M Safapour
Journal:  J Mol Model       Date:  2021-02-28       Impact factor: 1.810

7.  Computational analysis of the formation mechanisms of carbazoles.

Authors:  Sinan Basceken
Journal:  J Mol Model       Date:  2022-03-02       Impact factor: 1.810

Review 8.  Computational studies on the regioselectivity of metal-catalyzed synthesis of 1,2,3 triazoles via click reaction: a review.

Authors:  Tayebeh Hosseinnejad; Bahareh Fattahi; Majid M Heravi
Journal:  J Mol Model       Date:  2015-09-18       Impact factor: 1.810

9.  Assessment of the "6-31+G** + LANL2DZ" mixed basis set coupled with density functional theory methods and the effective core potential: prediction of heats of formation and ionization potentials for first-row-transition-metal complexes.

Authors:  Yue Yang; Michael N Weaver; Kenneth M Merz
Journal:  J Phys Chem A       Date:  2009-09-10       Impact factor: 2.781

10.  Low-Lying Electronic States of the Nickel Dimer.

Authors:  Patrick K Tamukong; Mark R Hoffmann
Journal:  Front Chem       Date:  2021-05-13       Impact factor: 5.221

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.