Literature DB >> 16832727

Amplification of DNA encoding entire type I polyketide synthase domains and linkers from streptomyces species.

Jo-Anne Chuck1, Catherine Dunn, Fe E C D Facultad, Chojin Nakazono, Jasmina Nikodinovic, Kevin D Barrow.   

Abstract

Polyketides are a group of bioactive compounds from bacteria, plants, and fungi. To increase the availability of analogs for testing, the active sites of polyketide synthases are often substituted with homologous domains having altered substrate specificities. This study reports the design of polymerase chain reaction primers that enables isolation of entire active site domains from type I polyketide synthases with native interdomain linkers. This bypasses the need for further genetic screening to obtain functional units for use in genetic engineering. This is especially important in bioprospecting projects exploring new environments for bioresources.

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Year:  2006        PMID: 16832727     DOI: 10.1007/s00284-005-0050-x

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  33 in total

Review 1.  Intermodular communication in polyketide synthases: comparing the role of protein-protein interactions to those in other multidomain proteins.

Authors:  S Y Tsuji; N Wu; C Khosla
Journal:  Biochemistry       Date:  2001-02-27       Impact factor: 3.162

Review 2.  Modular enzymes.

Authors:  C Khosla; P B Harbury
Journal:  Nature       Date:  2001-01-11       Impact factor: 49.962

3.  High yield preparation of genomic DNA from Streptomyces.

Authors:  Jasmina Nikodinovic; Kevin D Barrow; Jo-Anne Chuck
Journal:  Biotechniques       Date:  2003-11       Impact factor: 1.993

4.  Recombinant environmental libraries provide access to microbial diversity for drug discovery from natural products.

Authors:  Sophie Courtois; Carmela M Cappellano; Maria Ball; Francois-Xavier Francou; Philippe Normand; Gérard Helynck; Asuncion Martinez; Steven J Kolvek; Joern Hopke; Marcia S Osburne; Paul R August; Renaud Nalin; Michel Guérineau; Pascale Jeannin; Pascal Simonet; Jean-Luc Pernodet
Journal:  Appl Environ Microbiol       Date:  2003-01       Impact factor: 4.792

5.  Alteration of the substrate specificity of a modular polyketide synthase acyltransferase domain through site-specific mutations.

Authors:  C D Reeves; S Murli; G W Ashley; M Piagentini; C R Hutchinson; R McDaniel
Journal:  Biochemistry       Date:  2001-12-25       Impact factor: 3.162

6.  The candicidin gene cluster from Streptomyces griseus IMRU 3570.

Authors:  Ana Belén Campelo; José A Gil
Journal:  Microbiology       Date:  2002-01       Impact factor: 2.777

7.  Amphotericin biosynthesis in Streptomyces nodosus: deductions from analysis of polyketide synthase and late genes.

Authors:  P Caffrey; S Lynch; E Flood; S Finnan; M Oliynyk
Journal:  Chem Biol       Date:  2001-07

8.  Identification of DEBS 1, DEBS 2 and DEBS 3, the multienzyme polypeptides of the erythromycin-producing polyketide synthase from Saccharopolyspora erythraea.

Authors:  P Caffrey; D J Bevitt; J Staunton; P F Leadlay
Journal:  FEBS Lett       Date:  1992-06-15       Impact factor: 4.124

9.  Cloning and characterization of a polyketide synthase gene from Streptomyces fradiae Tü2717, which carries the genes for biosynthesis of the angucycline antibiotic urdamycin A and a gene probably involved in its oxygenation.

Authors:  H Decker; S Haag
Journal:  J Bacteriol       Date:  1995-11       Impact factor: 3.490

10.  An efficient method for creation and functional analysis of libraries of hybrid type I polyketide synthases.

Authors:  Beom Seok Kim; David H Sherman; Kevin A Reynolds
Journal:  Protein Eng Des Sel       Date:  2004-04-05       Impact factor: 1.650

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  1 in total

1.  Exploring the antagonistic producer Streptomyces MSI051: implications of polyketide synthase gene type II and a ubiquitous defense enzyme phospholipase A2 in the host sponge Dendrilla nigra.

Authors:  Joseph Selvin
Journal:  Curr Microbiol       Date:  2009-01-07       Impact factor: 2.188

  1 in total

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