Literature DB >> 16829785

Investigating cis-acting regulatory variation using assays of relative allelic expression.

Nicholas J Bray1, Michael C O'Donovan.   

Abstract

Assays of relative allelic expression offer a powerful means of exploring the influence of cis-acting regulatory variation. In this article, we provide a general assay protocol and discuss practical and theoretical considerations for the design and interpretation of relative allelic expression analysis.

Mesh：

Substances：

Year:  2006        PMID： 16829785     DOI： 10.1097/01.ypg.0000218612.35139.84

Source DB:  PubMed          Journal:  Psychiatr Genet        ISSN： 0955-8829            Impact factor:   2.458


  10 in total

1.  Differential allelic expression of c.1568C > A at UGT2B15 is due to variation in a novel cis-regulatory element in the 3'UTR.

Authors:  Chang Sun; Catherine Southard; Olufunmilayo I Olopade; Anna Di Rienzo
Journal:  Gene       Date:  2011-04-13       Impact factor: 3.688

Review 2.  Gene expression in the etiology of schizophrenia.

Authors:  Nicholas J Bray
Journal:  Schizophr Bull       Date:  2008-03-11       Impact factor: 9.306

3.  Allelic imbalance (AI) identifies novel tissue-specific cis-regulatory variation for human UGT2B15.

Authors:  Chang Sun; Catherine Southard; David B Witonsky; Olufunmilayo I Olopade; Anna Di Rienzo
Journal:  Hum Mutat       Date:  2010-01       Impact factor: 4.878

4.  Evidence of allelic imbalance in the schizophrenia susceptibility gene ZNF804A in human dorsolateral prefrontal cortex.

Authors:  Ilaria Guella; Adolfo Sequeira; Brandi Rollins; Ling Morgan; Richard M Myers; Stanley J Watson; Huda Akil; William E Bunney; Lynn E Delisi; William Byerley; Marquis P Vawter
Journal:  Schizophr Res       Date:  2013-12-07       Impact factor: 4.939

5.  Identification of rs11615992 as a novel regulatory SNP for human P2RX7 by allele-specific expression.

Authors:  Tao Peng; Li Zhong; Jing Gao; Zhu Wan; Wei-Ping Fu; Chang Sun
Journal:  Mol Genet Genomics       Date:  2019-08-13       Impact factor: 3.291

6.  Study of transcriptional effects in Cis at the IFIH1 locus.

Authors:  Hana Zouk; Luc Marchand; Constantin Polychronakos
Journal:  PLoS One       Date:  2010-07-13       Impact factor: 3.240

7.  A functional haplotype implicated in vulnerability to develop cocaine dependence is associated with reduced PDYN expression in human brain.

Authors:  Vadim Yuferov; Fei Ji; David A Nielsen; Orna Levran; Ann Ho; Susan Morgello; Ruijin Shi; Jurg Ott; Mary Jeanne Kreek
Journal:  Neuropsychopharmacology       Date:  2008-10-15       Impact factor: 7.853

8.  Cis-regulatory variation is typically polyallelic in Drosophila.

Authors:  Jonathan D Gruber; Anthony D Long
Journal:  Genetics       Date:  2008-12-08       Impact factor: 4.562

9.  Next-generation DNA sequencing-based assay for measuring allelic expression imbalance (AEI) of candidate neuropsychiatric disorder genes in human brain.

Authors:  Xiang Xu; Hao Wang; Min Zhu; Yue Sun; Yu Tao; Qin He; Jian Wang; Li Chen; David Saffen
Journal:  BMC Genomics       Date:  2011-10-20       Impact factor: 3.969

10.  Germline variants in MRE11/RAD50/NBN complex genes in childhood leukemia.

Authors:  Maria Mosor; Iwona Ziółkowska-Suchanek; Karina Nowicka; Agnieszka Dzikiewicz-Krawczyk; Danuta Januszkiewicz-Lewandowska; Jerzy Nowak
Journal:  BMC Cancer       Date:  2013-10-05       Impact factor: 4.430
  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.