Literature DB >> 16829132

Inositol phosphate metabolomics: merging genetic perturbation with modernized radiolabeling methods.

Jill Stevenson-Paulik1, Shean-Tai Chiou, Josh P Frederick, June dela Cruz, Andrew M Seeds, James C Otto, John D York.   

Abstract

Recent discoveries that provide a link between inositol phosphate (IP) signaling and fundamental cellular processes evoke many exciting new hypotheses about IP function, and underscore the importance of understanding how IP synthesis is regulated. Central to studies of IP metabolism is the essential development of efficient, fast, and reproducible methods for quantitative analysis of IPs in systems ranging from simple cell cultures to more complex tissues and whole organisms. Additionally, in many cases there is a need to pharmacologically and/or genetically alter IP kinase and phosphatase activities in order to visualize low abundance inositol signaling messengers. Here, we describe updated methods for rapid analysis of IP metabolism in normal and genetically manipulated Saccharomyces cerevisiae, Arabidopsis thaliana, Drosophila melanogaster, Mus musculus, and Homo sapiens.

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Year:  2006        PMID: 16829132     DOI: 10.1016/j.ymeth.2006.05.012

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  10 in total

1.  Metabolic Labeling of Inositol Phosphates and Phosphatidylinositols in Yeast and Mammalian Cells.

Authors:  Andrew T Hale; Bradley P Clarke; John D York
Journal:  Methods Mol Biol       Date:  2020

2.  Phosphoinositide [PI(3,5)P2] lipid-dependent regulation of the general transcriptional regulator Tup1.

Authors:  Bong-Kwan Han; Scott D Emr
Journal:  Genes Dev       Date:  2011-05-01       Impact factor: 11.361

Review 3.  Synthesis and function of membrane phosphoinositides in budding yeast, Saccharomyces cerevisiae.

Authors:  Thomas Strahl; Jeremy Thorner
Journal:  Biochim Biophys Acta       Date:  2007-02-06

4.  Development of Novel IP6K Inhibitors for the Treatment of Obesity and Obesity-Induced Metabolic Dysfunctions.

Authors:  Yubai Zhou; Sandip Mukherjee; Daowei Huang; Molee Chakraborty; Chunfang Gu; Guangning Zong; Michael A Stashko; Kenneth H Pearce; Stephen B Shears; Anutosh Chakraborty; Huanchen Wang; Xiaodong Wang
Journal:  J Med Chem       Date:  2022-04-25       Impact factor: 8.039

5.  Increasing plasma membrane phosphatidylinositol(4,5)bisphosphate biosynthesis increases phosphoinositide metabolism in Nicotiana tabacum.

Authors:  Yang Ju Im; Imara Y Perera; Irena Brglez; Amanda J Davis; Jill Stevenson-Paulik; Brian Q Phillippy; Eva Johannes; Nina S Allen; Wendy F Boss
Journal:  Plant Cell       Date:  2007-05-11       Impact factor: 11.277

6.  Synergism between Inositol Polyphosphates and TOR Kinase Signaling in Nutrient Sensing, Growth Control, and Lipid Metabolism in Chlamydomonas.

Authors:  Inmaculada Couso; Bradley S Evans; Jia Li; Yu Liu; Fangfang Ma; Spencer Diamond; Doug K Allen; James G Umen
Journal:  Plant Cell       Date:  2016-09-06       Impact factor: 11.277

7.  Structural features of human inositol phosphate multikinase rationalize its inositol phosphate kinase and phosphoinositide 3-kinase activities.

Authors:  Huanchen Wang; Stephen B Shears
Journal:  J Biol Chem       Date:  2017-09-07       Impact factor: 5.157

8.  Phosphoinositide and inositol phosphate analysis in lymphocyte activation.

Authors:  Karsten Sauer; Yina Hsing Huang; Hongying Lin; Mark Sandberg; Georg W Mayr
Journal:  Curr Protoc Immunol       Date:  2009-11

Review 9.  Importance of Radioactive Labelling to Elucidate Inositol Polyphosphate Signalling.

Authors:  Miranda S C Wilson; Adolfo Saiardi
Journal:  Top Curr Chem (Cham)       Date:  2017-01-18

10.  Certain Malvaceae Plants Have a Unique Accumulation of myo-Inositol 1,2,4,5,6-Pentakisphosphate.

Authors:  Brian Q Phillippy; Imara Y Perera; Janet L Donahue; Glenda E Gillaspy
Journal:  Plants (Basel)       Date:  2015-05-29
  10 in total

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