Literature DB >> 16823177

Prognostic value of adaptive textural features--the effect of standardizing nuclear first-order gray level statistics and mixing information from nuclei having different area.

Birgitte Nielsen1, Håvard E Danielsen.   

Abstract

BACKGROUND: Nuclear texture analysis is a useful method to obtain quantitative information for use in prognosis of cancer. The first-order gray level statistics of a digitized light microscopic nuclear image may be influenced by variations in the image input conditions. Therefore, we have previously standardized the nuclear gray level mean value and standard deviation. However, there is a clear relation between nuclear DNA content, area, first-order statistics, and texture. For nuclei with approximately the same DNA content, the mean gray level increases with an increasing nuclear area. The aims of the present methodical work were to study: (1) whether the prognostic value of adaptive textural features varies with nuclear area, and (2) the effect of standardizing nuclear first-order statistics.
METHODS: Nuclei from 134 cases of ovarian cancer were grouped into intervals according to nuclear area. Adaptive features were extracted from two different image sets, i.e., standardized and non-standardized nuclear images.
RESULTS: The prognostic value of adaptive textural features varied strongly with nuclear area. A standardization of the first-order statistics significantly reduced this prognostic information. Several single features discriminated the two classes of cancer with a correct classification rate of 70%.
CONCLUSION: Nuclei having an area between 2000-4999 pixels contained most of the class distance information between the good and poor prognosis classes of cancer. By considering the relation between nuclear area and texture, we avoided a loss of information caused by standardizing the first-order statistics and mixing data from cells having different nuclear area.

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Year:  2006        PMID: 16823177      PMCID: PMC4615946          DOI: 10.1155/2006/370173

Source DB:  PubMed          Journal:  Cell Oncol        ISSN: 1570-5870            Impact factor:   6.730


  6 in total

1.  Classification of hematologic malignancies using texton signatures.

Authors:  Oncel Tuzel; Lin Yang; Peter Meer; David J Foran
Journal:  Pattern Anal Appl       Date:  2007-10-01       Impact factor: 2.580

2.  Comparison of nuclear texture analysis and image cytometric DNA analysis for the assessment of dysplasia in Barrett's oesophagus.

Authors:  J M Dunn; T Hveem; M Pretorius; D Oukrif; B Nielsen; F Albregtsen; L B Lovat; M R Novelli; H E Danielsen
Journal:  Br J Cancer       Date:  2011-09-20       Impact factor: 7.640

3.  Low-order non-spatial effects dominate second-order spatial effects in the texture quantifier analysis of 18F-FDG-PET images.

Authors:  Frank J Brooks; Perry W Grigsby
Journal:  PLoS One       Date:  2015-02-25       Impact factor: 3.240

4.  Association Between Proportion of Nuclei With High Chromatin Entropy and Prognosis in Gynecological Cancers.

Authors:  Birgitte Nielsen; Andreas Kleppe; Tarjei Sveinsgjerd Hveem; Manohar Pradhan; Rolf Anders Syvertsen; John Arne Nesheim; Gunnar Balle Kristensen; Jone Trovik; David James Kerr; Fritz Albregtsen; Håvard Emil Danielsen
Journal:  J Natl Cancer Inst       Date:  2018-12-01       Impact factor: 13.506

5.  Entropy-based adaptive nuclear texture features are independent prognostic markers in a total population of uterine sarcomas.

Authors:  Birgitte Nielsen; Tarjei Sveinsgjerd Hveem; Wanja Kildal; Vera M Abeler; Gunnar B Kristensen; Fritz Albregtsen; Håvard E Danielsen
Journal:  Cytometry A       Date:  2014-12-05       Impact factor: 4.355

6.  Chromatin changes predict recurrence after radical prostatectomy.

Authors:  Tarjei S Hveem; Andreas Kleppe; Ljiljana Vlatkovic; Elin Ersvær; Håkon Wæhre; Birgitte Nielsen; Marte Avranden Kjær; Manohar Pradhan; Rolf Anders Syvertsen; John Arne Nesheim; Knut Liestøl; Fritz Albregtsen; Håvard E Danielsen
Journal:  Br J Cancer       Date:  2016-04-28       Impact factor: 7.640

  6 in total

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