Literature DB >> 16823034

Nonenzymatic biotinylation of a biotin carboxyl carrier protein: unusual reactivity of the physiological target lysine.

Emily D Streaker1, Dorothy Beckett.   

Abstract

Enzyme-catalyzed addition of biotin to proteins is highly specific. In any single organism one or a small number of proteins are biotinylated and only a single lysine on each of these proteins is modified. A detailed understanding of the structural basis for the selective biotinylation process has not yet been elucidated. Recently certain mutants of the Escherichia coli biotin protein ligase have been shown to mediate "promiscuous" biotinylation of proteins. It was suggested that the reaction involved diffusion of a reactive activated biotin intermediate, biotinoyl-5'-AMP, with nonspecific proteins. In this work the reactivity of this chemically synthesized intermediate toward the natural target of enzymatic biotinylation, the biotin carboxyl carrier protein, was investigated. The results indicate that the intermediate does, indeed, react with target protein, albeit at a significantly slower rate than the enzyme-catalyzed process. Surprisingly, analysis of the products of nonenzymatic biotinylation indicates that of five lysine residues in the protein only the physiological target side chain is modified. These results indicate that either the environment of this lysine residue or its intrinsic properties render it highly reactive to nonenzymatic biotinylation mediated by biotinoyl-5'-AMP. This reactivity may be important for its selective biotinylation in vivo.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16823034      PMCID: PMC2242587          DOI: 10.1110/ps.062187306

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  17 in total

1.  High resolution solution structure of the 1.3S subunit of transcarboxylase from Propionibacterium shermanii.

Authors:  D V Reddy; B C Shenoy; P R Carey; F D Sönnichsen
Journal:  Biochemistry       Date:  2000-03-14       Impact factor: 3.162

2.  Competing protein:protein interactions are proposed to control the biological switch of the E coli biotin repressor.

Authors:  L H Weaver; K Kwon; D Beckett; B W Matthews
Journal:  Protein Sci       Date:  2001-12       Impact factor: 6.725

3.  MOLMOL: a program for display and analysis of macromolecular structures.

Authors:  R Koradi; M Billeter; K Wüthrich
Journal:  J Mol Graph       Date:  1996-02

4.  Structure of the carboxy-terminal fragment of the apo-biotin carboxyl carrier subunit of Escherichia coli acetyl-CoA carboxylase.

Authors:  X Yao; D Wei; C Soden; M F Summers; D Beckett
Journal:  Biochemistry       Date:  1997-12-09       Impact factor: 3.162

5.  Rhodopsin's carboxyl-terminal threonines are required for wild-type arrestin-mediated quench of transducin activation in vitro.

Authors:  M T Brannock; K Weng; P R Robinson
Journal:  Biochemistry       Date:  1999-03-23       Impact factor: 3.162

6.  Structure of the biotinyl domain of acetyl-coenzyme A carboxylase determined by MAD phasing.

Authors:  F K Athappilly; W A Hendrickson
Journal:  Structure       Date:  1995-12-15       Impact factor: 5.006

7.  Mutational analysis of protein substrate presentation in the post-translational attachment of biotin to biotin domains.

Authors:  S W Polyak; A Chapman-Smith; T D Mulhern; J E Cronan; J C Wallace
Journal:  J Biol Chem       Date:  2000-10-19       Impact factor: 5.157

8.  Promiscuous protein biotinylation by Escherichia coli biotin protein ligase.

Authors:  Eunjoo Choi-Rhee; Howard Schulman; John E Cronan
Journal:  Protein Sci       Date:  2004-09-30       Impact factor: 6.725

9.  Purification and characterization of intact and truncated forms of the Escherichia coli biotin carboxyl carrier subunit of acetyl-CoA carboxylase.

Authors:  E Nenortas; D Beckett
Journal:  J Biol Chem       Date:  1996-03-29       Impact factor: 5.157

10.  The biotin repressor: modulation of allostery by corepressor analogs.

Authors:  Patrick H Brown; John E Cronan; Morten Grøtli; Dorothy Beckett
Journal:  J Mol Biol       Date:  2004-04-02       Impact factor: 5.469

View more
  8 in total

1.  Crystallization and preliminary X-ray crystallographic studies of the biotin carboxyl carrier protein and biotin protein ligase complex from Pyrococcus horikoshii OT3.

Authors:  Bagautdin Bagautdinov; Yoshinori Matsuura; Svetlana Bagautdinova; Naoki Kunishima
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-03-30

Review 2.  Proximity Dependent Biotinylation: Key Enzymes and Adaptation to Proteomics Approaches.

Authors:  Payman Samavarchi-Tehrani; Reuben Samson; Anne-Claude Gingras
Journal:  Mol Cell Proteomics       Date:  2020-03-03       Impact factor: 5.911

3.  Protein moonlighting elucidates the essential human pathway catalyzing lipoic acid assembly on its cognate enzymes.

Authors:  Xinyun Cao; Lei Zhu; Xuejiao Song; Zhe Hu; John E Cronan
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-09       Impact factor: 11.205

4.  Site-Specific Detection and Characterization of Ubiquitin Carbamylation.

Authors:  Westley Pawloski; Teppei Komiyama; Christos Kougentakis; Ananya Majumdar; David Fushman
Journal:  Biochemistry       Date:  2022-04-05       Impact factor: 3.321

5.  Nonenzymatic biotinylation of histone H2A.

Authors:  Shannon Healy; Tom D Heightman; Laura Hohmann; David Schriemer; Roy A Gravel
Journal:  Protein Sci       Date:  2009-02       Impact factor: 6.725

6.  The Thermoplasma acidophilum LplA-LplB complex defines a new class of bipartite lipoate-protein ligases.

Authors:  Quin H Christensen; John E Cronan
Journal:  J Biol Chem       Date:  2009-06-11       Impact factor: 5.157

7.  A promiscuous biotin ligase fusion protein identifies proximal and interacting proteins in mammalian cells.

Authors:  Kyle J Roux; Dae In Kim; Manfred Raida; Brian Burke
Journal:  J Cell Biol       Date:  2012-03-12       Impact factor: 10.539

Review 8.  Mapping the SARS-CoV-2-Host Protein-Protein Interactome by Affinity Purification Mass Spectrometry and Proximity-Dependent Biotin Labeling: A Rational and Straightforward Route to Discover Host-Directed Anti-SARS-CoV-2 Therapeutics.

Authors:  Rosa Terracciano; Mariaimmacolata Preianò; Annalisa Fregola; Corrado Pelaia; Tiziana Montalcini; Rocco Savino
Journal:  Int J Mol Sci       Date:  2021-01-07       Impact factor: 5.923

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.