Literature DB >> 16822045

Stochastic modeling of neurobiological time series: power, coherence, Granger causality, and separation of evoked responses from ongoing activity.

Yonghong Chen1, Steven L Bressler, Kevin H Knuth, Wilson A Truccolo, Mingzhou Ding.   

Abstract

In this article we consider the stochastic modeling of neurobiological time series from cognitive experiments. Our starting point is the variable-signal-plus-ongoing-activity model. From this model a differentially variable component analysis strategy is developed from a Bayesian perspective to estimate event-related signals on a single trial basis. After subtracting out the event-related signal from recorded single trial time series, the residual ongoing activity is treated as a piecewise stationary stochastic process and analyzed by an adaptive multivariate autoregressive modeling strategy which yields power, coherence, and Granger causality spectra. Results from applying these methods to local field potential recordings from monkeys performing cognitive tasks are presented.

Mesh:

Year:  2006        PMID: 16822045     DOI: 10.1063/1.2208455

Source DB:  PubMed          Journal:  Chaos        ISSN: 1054-1500            Impact factor:   3.642


  12 in total

1.  Time series analysis of hybrid neurophysiological data and application of mutual information.

Authors:  Atanu Biswas; Apratim Guha
Journal:  J Comput Neurosci       Date:  2009-05-28       Impact factor: 1.621

2.  Analyzing multiple spike trains with nonparametric Granger causality.

Authors:  Aatira G Nedungadi; Govindan Rangarajan; Neeraj Jain; Mingzhou Ding
Journal:  J Comput Neurosci       Date:  2009-01-10       Impact factor: 1.621

3.  Multivariate Granger causality: an estimation framework based on factorization of the spectral density matrix.

Authors:  Xiaotong Wen; Govindan Rangarajan; Mingzhou Ding
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2013-07-15       Impact factor: 4.226

4.  Estimating Granger causality after stimulus onset: a cautionary note.

Authors:  Xue Wang; Yonghong Chen; Mingzhou Ding
Journal:  Neuroimage       Date:  2008-03-26       Impact factor: 6.556

5.  Human thalamus regulates cortical activity via spatially specific and structurally constrained phase-amplitude coupling.

Authors:  Mahsa Malekmohammadi; W Jeff Elias; Nader Pouratian
Journal:  Cereb Cortex       Date:  2014-01-09       Impact factor: 5.357

6.  Effects of emotional conditioning on early visual processing: temporal dynamics revealed by ERP single-trial analysis.

Authors:  Yuelu Liu; Andreas Keil; Mingzhou Ding
Journal:  Hum Brain Mapp       Date:  2011-04-15       Impact factor: 5.038

7.  Neural substrate of the late positive potential in emotional processing.

Authors:  Yuelu Liu; Haiqing Huang; Menton McGinnis-Deweese; Andreas Keil; Mingzhou Ding
Journal:  J Neurosci       Date:  2012-10-17       Impact factor: 6.167

8.  A comparison of Granger causality and coherency in fMRI-based analysis of the motor system.

Authors:  Andrew S Kayser; Felice T Sun; Mark D'Esposito
Journal:  Hum Brain Mapp       Date:  2009-11       Impact factor: 5.038

9.  Multimodal effects of local context on target detection: evidence from P3b.

Authors:  Noa Fogelson; Xue Wang; Jeffrey B Lewis; Mark M Kishiyama; Mingzhou Ding; Robert T Knight
Journal:  J Cogn Neurosci       Date:  2009-09       Impact factor: 3.225

10.  Emergence of physiological oscillation frequencies in a computer model of neocortex.

Authors:  Samuel A Neymotin; Heekyung Lee; Eunhye Park; André A Fenton; William W Lytton
Journal:  Front Comput Neurosci       Date:  2011-04-19       Impact factor: 2.380

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