Literature DB >> 16821784

From ligand to complexes: inhibition of human immunodeficiency virus type 1 integrase by beta-diketo acid metal complexes.

Mario Sechi1, Alessia Bacchi, Mauro Carcelli, Carlotta Compari, Elenia Duce, Emilia Fisicaro, Dominga Rogolino, Paul Gates, Marco Derudas, Laith Q Al-Mawsawi, Nouri Neamati.   

Abstract

beta-Diketo acid-containing compounds are a promising class of human immunodeficiency virus type 1 (HIV-1) integrase (IN) inhibitors. Starting from the hypothesis that these inhibitors are able to coordinate ions in solution before interacting on the active site, a series of potentiometric measurements have been performed to understand the coordination ability of the diketo acid pharmacophore toward the biologically relevant Mg(2+). Moreover, by using beta-diketo acid/ester as model ligands with a set of divalent metal ions (Mg, Mn, Ni, Co, Cu, and Zn), we obtained a series of complexes and tested them for anti-HIV-1 IN activity. Results demonstrate that the diketo acid functionality chelates divalent metal ions in solution, and complexes with metals in different stoichiometric ratios are isolated. We postulate that the diketo acids act as complexes in their active form. In particular, they predominantly form species such as Mg(2)L(2+) and Mg(2)L(2) (derived from diketo acids, H(2)L), and MgL(+) and MgL(2) (derived from diketo esters, HL) at physiological pH. Furthermore, the synthesized mono- and dimetallic complexes inhibited IN at a high nanomolar to low micromolar range, with metal dependency in the phenyl diketo acid series. Retrospective analysis suggests that the electronic properties of the aromatic framework influence the metal-chelating ability of the diketo acid system. Therefore, the difference in activities is related to the complexes they preferentially form in solution, and these findings are important for the design of a new generation of IN inhibitors.

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Year:  2006        PMID: 16821784     DOI: 10.1021/jm060193m

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  12 in total

1.  Tautomerism and magnesium chelation of HIV-1 integrase inhibitors: a theoretical study.

Authors:  Chenzhong Liao; Marc C Nicklaus
Journal:  ChemMedChem       Date:  2010-07-05       Impact factor: 3.466

2.  Structure-activity relationship of pyrrolyl diketo acid derivatives as dual inhibitors of HIV-1 integrase and reverse transcriptase ribonuclease H domain.

Authors:  Giuliana Cuzzucoli Crucitti; Mathieu Métifiot; Luca Pescatori; Antonella Messore; Valentina Noemi Madia; Giovanni Pupo; Francesco Saccoliti; Luigi Scipione; Silvano Tortorella; Francesca Esposito; Angela Corona; Marta Cadeddu; Christophe Marchand; Yves Pommier; Enzo Tramontano; Roberta Costi; Roberto Di Santo
Journal:  J Med Chem       Date:  2015-02-11       Impact factor: 7.446

3.  N-Hydroxyphthalimide-Mediated Electrochemical Iodination of Methylarenes and Comparison to Electron-Transfer-Initiated C-H Functionalization.

Authors:  Mohammad Rafiee; Fei Wang; Damian P Hruszkewycz; Shannon S Stahl
Journal:  J Am Chem Soc       Date:  2017-12-19       Impact factor: 15.419

4.  Mutational analysis of the binding pockets of the diketo acid inhibitor L-742,001 in the influenza virus PA endonuclease.

Authors:  Annelies Stevaert; Roberto Dallocchio; Alessandro Dessì; Nicolino Pala; Dominga Rogolino; Mario Sechi; Lieve Naesens
Journal:  J Virol       Date:  2013-07-03       Impact factor: 5.103

5.  Triazolyl Ru(II), Os(II), and Ir(III) complexes as potential HIV-1 inhibitors.

Authors:  Brandon Putterill; Charles Rono; Banothile Makhubela; Debra Meyer; Ntombenhle Gama
Journal:  Biometals       Date:  2022-06-14       Impact factor: 3.378

6.  Synthesis and Crystal Structure Characterization of Zinc (II) Tetronic Acid Complexes.

Authors:  K C Prousis; G Athanasellis; V Stefanou; D Matiadis; E Kokalari; O Igglessi-Markopoulou; V McKee; J Markopoulos
Journal:  Bioinorg Chem Appl       Date:  2010-11-04       Impact factor: 7.778

7.  Hybrid quantum mechanical/molecular mechanical molecular dynamics simulations of HIV-1 integrase/inhibitor complexes.

Authors:  Nadtanet Nunthaboot; Somsak Pianwanit; Vudhichai Parasuk; Jerry O Ebalunode; James M Briggs; Sirirat Kokpol
Journal:  Biophys J       Date:  2007-08-10       Impact factor: 4.033

8.  Design, synthesis, and structure-activity relationship exploration of 1-substituted 4-aroyl-3-hydroxy-5-phenyl-1H-pyrrol-2(5H)-one analogues as inhibitors of the annexin A2-S100A10 protein interaction.

Authors:  Tummala R K Reddy; Chan Li; Xiaoxia Guo; Helene K Myrvang; Peter M Fischer; Lodewijk V Dekker
Journal:  J Med Chem       Date:  2011-03-04       Impact factor: 7.446

9.  Binding mode prediction and inhibitor design of anti-influenza virus diketo acids targeting metalloenzyme RNA polymerase by molecular docking.

Authors:  Yoshinobu Ishikawa; Satoshi Fujii
Journal:  Bioinformation       Date:  2011-06-06

Review 10.  Raltegravir: molecular basis of its mechanism of action.

Authors:  Jean-Francois Mouscadet; Luba Tchertanov
Journal:  Eur J Med Res       Date:  2009-11-24       Impact factor: 2.175

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