Literature DB >> 16820687

The purification, crystallization and preliminary diffraction of a glycerophosphodiesterase from Enterobacter aerogenes.

Colin J Jackson1, Paul D Carr, Hye Kyung Kim, Jian Wei Liu, David L Ollis.   

Abstract

The metallo-glycerophosphodiesterase from Enterobacter aerogenes (GpdQ) has been cloned, expressed in Escherichia coli and purified. Initial screening of crystallization conditions for this enzyme resulted in the identification of needles from one condition in a sodium malonate grid screen. Removal of the metals from the enzyme and subsequent optimization of these conditions led to crystals that diffracted to 2.9 angstroms and belonged to space group P2(1)3, with unit-cell parameter a = 164.1 angstroms. Self-rotation function analysis and V(M) calculations indicated that the asymmetric unit contains two copies of the monomeric enzyme, corresponding to a solvent content of 79%. It is intended to determine the structure of this protein utilizing SAD phasing from transition metals or molecular replacement.

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Year:  2006        PMID: 16820687      PMCID: PMC2242963          DOI: 10.1107/S1744309106020021

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  14 in total

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Authors:  Steve P Meisburger; William C Thomas; Maxwell B Watkins; Nozomi Ando
Journal:  Chem Rev       Date:  2017-05-30       Impact factor: 60.622

2.  Malonate-bound structure of the glycerophosphodiesterase from Enterobacter aerogenes (GpdQ) and characterization of the native Fe2+ metal-ion preference.

Authors:  Colin J Jackson; Kieran S Hadler; Paul D Carr; Aaron J Oakley; Sylvia Yip; Gerhard Schenk; David L Ollis
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-07-05

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-07-28
  3 in total

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