Literature DB >> 16819952

Highly diverse community structure in a remote central Tibetan geothermal spring does not display monotonic variation to thermal stress.

Lau Chui Yim1, Jing Hongmei, Jonathan C Aitchison, Stephen B Pointing.   

Abstract

We report an assessment of whole-community diversity for an extremely isolated geothermal location with considerable phylogenetic and phylogeographic novelty. We further demonstrate, using multiple statistical analyses of sequence data, that the response of community diversity is not monotonic to thermal stress along a gradient of 52-83 degrees C. A combination of domain- and division-specific PCR was used to obtain a broad spectrum of community phylotypes, which were resolved by denaturing gradient gel electrophoresis. Among 58 sequences obtained from microbial mats and streamers, some 95% suggest novel archaeal and bacterial diversity at the species level or higher. Moreover, new phylogeographic and thermally defined lineages among the Cyanobacteria, Chloroflexi, Eubacterium and Thermus are identified. Shannon-Wiener diversity estimates suggest that mats at 63 degrees C supported highest diversity, but when alternate models were applied [Average Taxonomic Distinctness (AvTD) and Variation in Taxonomic Distinctness (VarTD)] that also take into account the phylogenetic relationships between phylotypes, it is evident that greatest taxonomic diversity (AvTD) occurred in streamers at 65-70 degrees C, whereas greatest phylogenetic distance between taxa (VarTD) occurred in streamers of 83 degrees C. All models demonstrated that diversity is not related to thermal stress in a linear fashion.

Mesh:

Substances:

Year:  2006        PMID: 16819952     DOI: 10.1111/j.1574-6941.2006.00104.x

Source DB:  PubMed          Journal:  FEMS Microbiol Ecol        ISSN: 0168-6496            Impact factor:   4.194


  24 in total

1.  Diversity of Crenarchaeota in terrestrial hot springs in Tengchong, China.

Authors:  Zhao-Qi Song; Jing-Quan Chen; Hong-Chen Jiang; En-Min Zhou; Shu-Kun Tang; Xiao-Yang Zhi; Li-Xin Zhang; Chuan-Lun L Zhang; Wen-Jun Li
Journal:  Extremophiles       Date:  2010-04-07       Impact factor: 2.395

2.  Microbial Diversity in Soil, Sand Dune and Rock Substrates of the Thar Monsoon Desert, India.

Authors:  Subramanya Rao; Yuki Chan; Donnabella C Bugler-Lacap; Ashish Bhatnagar; Monica Bhatnagar; Stephen B Pointing
Journal:  Indian J Microbiol       Date:  2015-08-21       Impact factor: 2.461

3.  High abundance of heterotrophic prokaryotes in hydrothermal springs of the Azores as revealed by a network of 16S rRNA gene-based methods.

Authors:  Kerstin Sahm; Patrick John; Heiko Nacke; Bernd Wemheuer; Ralf Grote; Rolf Daniel; Garabed Antranikian
Journal:  Extremophiles       Date:  2013-05-26       Impact factor: 2.395

4.  Endolithic microbial colonization of limestone in a high-altitude arid environment.

Authors:  Fiona K Y Wong; Maggie C Y Lau; Donnabella C Lacap; Jonathan C Aitchison; Donald A Cowan; Stephen B Pointing
Journal:  Microb Ecol       Date:  2009-11-25       Impact factor: 4.552

5.  Archaeal and bacterial diversity in hot springs on the Tibetan Plateau, China.

Authors:  Qiuyuan Huang; Christina Z Dong; Raymond M Dong; Hongchen Jiang; Shang Wang; Genhou Wang; Bin Fang; Xiaoxue Ding; Lu Niu; Xin Li; Chuanlun Zhang; Hailiang Dong
Journal:  Extremophiles       Date:  2011-06-22       Impact factor: 2.395

6.  Diversity and Distribution of Thermophilic Bacteria in Hot Springs of Pakistan.

Authors:  Arshia Amin; Iftikhar Ahmed; Nimaichand Salam; Byung-Yong Kim; Dharmesh Singh; Xiao-Yang Zhi; Min Xiao; Wen-Jun Li
Journal:  Microb Ecol       Date:  2017-01-19       Impact factor: 4.552

7.  Diversity of bacteria and archaea from two shallow marine hydrothermal vents from Vulcano Island.

Authors:  Garabed Antranikian; Marcel Suleiman; Christian Schäfers; Michael W W Adams; Simonetta Bartolucci; Jenny M Blamey; Nils-Kåre Birkeland; Elizaveta Bonch-Osmolovskaya; Milton S da Costa; Don Cowan; Michael Danson; Patrick Forterre; Robert Kelly; Yoshizumi Ishino; Jennifer Littlechild; Marco Moracci; Kenneth Noll; Tairo Oshima; Frank Robb; Mosè Rossi; Helena Santos; Peter Schönheit; Reinhard Sterner; Rudolf Thauer; Michael Thomm; Jürgen Wiegel; Karl Otto Stetter
Journal:  Extremophiles       Date:  2017-05-10       Impact factor: 2.395

8.  Radiation-Tolerant Bacteria Isolated from High Altitude Soil in Tibet.

Authors:  Subramanya Rao; Olivia W Chan; Donnabella C Lacap-Bugler; Stephen B Pointing
Journal:  Indian J Microbiol       Date:  2016-06-16       Impact factor: 2.461

9.  Humboldt's spa: microbial diversity is controlled by temperature in geothermal environments.

Authors:  Christine E Sharp; Allyson L Brady; Glen H Sharp; Stephen E Grasby; Matthew B Stott; Peter F Dunfield
Journal:  ISME J       Date:  2014-01-16       Impact factor: 10.302

10.  Cyanobacteria and chloroflexi-dominated hypolithic colonization of quartz at the hyper-arid core of the Atacama Desert, Chile.

Authors:  Donnabella C Lacap; Kimberley A Warren-Rhodes; Christopher P McKay; Stephen B Pointing
Journal:  Extremophiles       Date:  2010-11-11       Impact factor: 2.395

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.