Literature DB >> 16815578

Horseradish and soybean peroxidases: comparable tools for alternative niches?

Barry J Ryan1, Neil Carolan, Ciarán O'Fágáin.   

Abstract

Horseradish and soybean peroxidases (HRP and SBP, respectively) are useful biotechnological tools. HRP is often termed the classical plant heme peroxidase and although it has been studied for decades, our understanding has deepened since its cloning and subsequent expression, enabling numerous mutational and protein engineering studies. SBP, however, has been neglected until recently, despite offering a real alternative to HRP: SBP actually outperforms HRP in terms of stability and is now used in numerous biotechnological applications, including biosensors. Review of both is timely. This article summarizes and discusses the main insights into the structure and mechanism of HRP, with special emphasis on HRP mutagenesis, and outlines its use in a variety of applications. It also reviews the current knowledge and applications to date of SBP, particularly biosensors. The final paragraphs speculate on the future of plant heme-based peroxidases, with probable trends outlined and explored.

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Year:  2006        PMID: 16815578     DOI: 10.1016/j.tibtech.2006.06.007

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   19.536


  21 in total

1.  Purification, crystallization and preliminary crystallographic analysis of peroxidase from the palm tree Chamaerops excelsa.

Authors:  Larissa C Textor; Jademilson C Santos; Nazaret Hidalgo Cuadrado; Manuel G Roig; Galina G Zhadan; Valery L Shnyrov; Igor Polikarpov
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-11-30

2.  Labeling of biotin antibodies with horseradish peroxidase using cyanuric chloride.

Authors:  Ramadan A Abuknesha; Fiona Jeganathan; Jocelyn Wu; Zakeya Baalawy
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

3.  Live diatom silica immobilization of multimeric and redox-active enzymes.

Authors:  V C Sheppard; A Scheffel; N Poulsen; N Kröger
Journal:  Appl Environ Microbiol       Date:  2011-11-04       Impact factor: 4.792

4.  Determination of L-tyrosine based on luminescence quenching of Mn-doped ZnSe quantum dots in enzyme catalysis system.

Authors:  Qiang Ma; Wei Yu; Hui Huang; Xingguang Su
Journal:  J Fluoresc       Date:  2010-07-08       Impact factor: 2.217

5.  Spatially resolved proteomic mapping in living cells with the engineered peroxidase APEX2.

Authors:  Victoria Hung; Namrata D Udeshi; Stephanie S Lam; Ken H Loh; Kurt J Cox; Kayvon Pedram; Steven A Carr; Alice Y Ting
Journal:  Nat Protoc       Date:  2016-02-11       Impact factor: 13.491

Review 6.  Proximity-dependent labeling methods for proteomic profiling in living cells.

Authors:  Chiao-Lin Chen; Norbert Perrimon
Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2017-04-07       Impact factor: 5.814

7.  How a single-point mutation in horseradish peroxidase markedly enhances enantioselectivity.

Authors:  Eugene Antipov; Art E Cho; Alexander M Klibanov
Journal:  J Am Chem Soc       Date:  2009-08-12       Impact factor: 15.419

8.  Production and purification of the multifunctional enzyme horseradish peroxidase.

Authors:  Oliver Spadiut; Christoph Herwig
Journal:  Pharm Bioprocess       Date:  2013-08-01

Review 9.  Proximity-dependent labeling methods for proteomic profiling in living cells: An update.

Authors:  Justin A Bosch; Chiao-Lin Chen; Norbert Perrimon
Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2020-09-10       Impact factor: 5.814

10.  Engineered ascorbate peroxidase as a genetically encoded reporter for electron microscopy.

Authors:  Jeffrey D Martell; Thomas J Deerinck; Yasemin Sancak; Thomas L Poulos; Vamsi K Mootha; Gina E Sosinsky; Mark H Ellisman; Alice Y Ting
Journal:  Nat Biotechnol       Date:  2012-10-21       Impact factor: 54.908

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