Literature DB >> 16806568

Natural selection on gene expression.

Yoav Gilad1, Alicia Oshlack, Scott A Rifkin.   

Abstract

Changes in genetic regulation contribute to adaptations in natural populations and influence susceptibility to human diseases. Despite their potential phenotypic importance, the selective pressures acting on regulatory processes in general and gene expression levels in particular are largely unknown. Studies in model organisms suggest that the expression levels of most genes evolve under stabilizing selection, although a few are consistent with adaptive evolution. However, it has been proposed that gene expression levels in primates evolve largely in the absence of selective constraints. In this article, we discuss the microarray-based observations that led to these disparate interpretations. We conclude that in both primates and model organisms, stabilizing selection is likely to be the dominant mode of gene expression evolution. An important implication is that mutations affecting gene expression will often be deleterious and might underlie many human diseases.

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Year:  2006        PMID: 16806568     DOI: 10.1016/j.tig.2006.06.002

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  93 in total

1.  Heterozygote advantage as a natural consequence of adaptation in diploids.

Authors:  Diamantis Sellis; Benjamin J Callahan; Dmitri A Petrov; Philipp W Messer
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-05       Impact factor: 11.205

2.  The genetic basis of evolutionary change in gene expression levels.

Authors:  J J Emerson; Wen-Hsiung Li
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-08-27       Impact factor: 6.237

3.  Changes in selective effects over time facilitate turnover of enhancer sequences.

Authors:  Kevin Bullaughey
Journal:  Genetics       Date:  2010-11-23       Impact factor: 4.562

4.  Rapid evolution of osmoregulatory function by modification of gene transcription in steelhead trout.

Authors:  Tutku Aykanat; Frank P Thrower; Daniel D Heath
Journal:  Genetica       Date:  2010-12-29       Impact factor: 1.082

5.  Extension of cortical synaptic development distinguishes humans from chimpanzees and macaques.

Authors:  Xiling Liu; Mehmet Somel; Lin Tang; Zheng Yan; Xi Jiang; Song Guo; Yuan Yuan; Liu He; Anna Oleksiak; Yan Zhang; Na Li; Yuhui Hu; Wei Chen; Zilong Qiu; Svante Pääbo; Philipp Khaitovich
Journal:  Genome Res       Date:  2012-02-02       Impact factor: 9.043

Review 6.  Molecular and evolutionary processes generating variation in gene expression.

Authors:  Mark S Hill; Pétra Vande Zande; Patricia J Wittkopp
Journal:  Nat Rev Genet       Date:  2020-12-02       Impact factor: 53.242

7.  Tissue-driven hypothesis of genomic evolution and sequence-expression correlations.

Authors:  Xun Gu; Zhixi Su
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-14       Impact factor: 11.205

8.  Chromosomal inversions and ecotypic differentiation in Anopheles gambiae: the perspective from whole-genome sequencing.

Authors:  R Rebecca Love; Aaron M Steele; Mamadou B Coulibaly; Sékou F Traore; Scott J Emrich; Michael C Fontaine; Nora J Besansky
Journal:  Mol Ecol       Date:  2016-11-09       Impact factor: 6.185

9.  Sex-specific and lineage-specific alternative splicing in primates.

Authors:  Ran Blekhman; John C Marioni; Paul Zumbo; Matthew Stephens; Yoav Gilad
Journal:  Genome Res       Date:  2009-12-15       Impact factor: 9.043

Review 10.  Declining cellular fitness with age promotes cancer initiation by selecting for adaptive oncogenic mutations.

Authors:  Andriy Marusyk; James DeGregori
Journal:  Biochim Biophys Acta       Date:  2007-10-12
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