Literature DB >> 16799746

Polyphasic analysis of Thermus isolates from geothermal areas in Iceland.

Gudmundur O Hreggvidsson1, Sigurlaug Skirnisdottir, Bart Smit, Sigridur Hjorleifsdottir, Viggo Th Marteinsson, Solveig Petursdottir, Jakob K Kristjansson.   

Abstract

Genetic relationships and diversity of 101 Thermus isolates from different geothermal regions in Iceland were investigated by using multilocus enzyme electrophoresis (MLEE) and small subunit ribosomal rRNA (SSU rRNA) sequence analysis. Ten polymorphic enzymes were used and seven distinct and genetically highly divergent lineages of Thermus were observed. Six of seven lineages could be assigned to species whose names have been validated. The most diverse lineage was Thermus scotoductus. In contrast to the other lineages, this lineage was divided into very distinct genetic sublineages that may represent subspecies with different habitat preferences. The least diverse lineage was Thermus brockianus. Phenotypic and physiological analysis was carried out on a subset of the isolates. No relationship was found between growth on specific single carbon source to the grouping obtained by the isoenzyme analysis. The response to various salts was distinguishing in a few cases. No relationship was found between temperature at the isolation site and the different lineages, but pH indicated a relation to specific lineages.

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Year:  2006        PMID: 16799746     DOI: 10.1007/s00792-006-0530-3

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  21 in total

1.  Thermus oshimai sp. nov., isolated from hot springs in Portugal, Iceland, and the Azores, and comment on the concept of a limited geographical distribution of Thermus species.

Authors:  R A Williams; K E Smith; S G Welch; J Micallef
Journal:  Int J Syst Bacteriol       Date:  1996-04

Review 2.  Phylogenetic identification and in situ detection of individual microbial cells without cultivation.

Authors:  R I Amann; W Ludwig; K H Schleifer
Journal:  Microbiol Rev       Date:  1995-03

3.  A rapid method for the base ratio determination of bacterial DNA.

Authors:  P Cashion; M A Holder-Franklin; J McCully; M Franklin
Journal:  Anal Biochem       Date:  1977-08       Impact factor: 3.365

4.  Studies on the spectrophotometric determination of DNA hybridization from renaturation rates.

Authors:  V A Huss; H Festl; K H Schleifer
Journal:  Syst Appl Microbiol       Date:  1983       Impact factor: 4.022

5.  Ecology and habitats of extremophiles.

Authors:  J K Kristjánsson; G O Hreggvidsson
Journal:  World J Microbiol Biotechnol       Date:  1995-01       Impact factor: 3.312

6.  Estimation of fixation indices and gene diversities.

Authors:  M Nei; R K Chesser
Journal:  Ann Hum Genet       Date:  1983-07       Impact factor: 1.670

7.  The quantitative measurement of DNA hybridization from renaturation rates.

Authors:  J De Ley; H Cattoir; A Reynaerts
Journal:  Eur J Biochem       Date:  1970-01

8.  Genetic diversity analysis of Rhodothermus reflects geographical origin of the isolates.

Authors:  S K Petursdottir; G O Hreggvidsson; M S Da Costa; J K Kristjansson
Journal:  Extremophiles       Date:  2000-10       Impact factor: 2.395

9.  Genetic structure of Neisseria meningitidis populations in relation to serogroup, serotype, and outer membrane protein pattern.

Authors:  D A Caugant; L F Mocca; C E Frasch; L O Frøholm; W D Zollinger; R K Selander
Journal:  J Bacteriol       Date:  1987-06       Impact factor: 3.490

10.  Thermus aquaticus gen. n. and sp. n., a nonsporulating extreme thermophile.

Authors:  T D Brock; H Freeze
Journal:  J Bacteriol       Date:  1969-04       Impact factor: 3.490

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  5 in total

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2.  Bacterial diversity in five Icelandic geothermal waters: temperature and sinter growth rate effects.

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Journal:  Extremophiles       Date:  2011-05-24       Impact factor: 2.395

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Journal:  Extremophiles       Date:  2013-04-09       Impact factor: 2.395

4.  Multilocus sequence analysis of Thermoanaerobacter isolates reveals recombining, but differentiated, populations from geothermal springs of the Uzon Caldera, Kamchatka, Russia.

Authors:  Isaac D Wagner; Litty B Varghese; Christopher L Hemme; Juergen Wiegel
Journal:  Front Microbiol       Date:  2013-06-21       Impact factor: 5.640

5.  Distribution, abundance, and diversity patterns of the thermoacidophilic "deep-sea hydrothermal vent euryarchaeota 2".

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