Literature DB >> 16793397

Characterization of checkpoint responses to DNA damage in Saccharomyces cerevisiae: basic protocols.

Ritu Pabla1, Vaibhav Pawar, Hong Zhang, Wolfram Siede.   

Abstract

In spite of certain special features of its cell cycle, the yeast Saccharomyces cerevisiae has proved to be an excellent and widely used model to study eukaryotic checkpoint responses to DNA damage. This chapter primarily summarizes selected cytological methods that are useful for initial characterization of cell cycle responses. These can be useful in order to study mutants, conditions, or selected DNA damaging agents and experimental examples are given. We have also included protocols for flow-cytometric cell cycle analysis and for determination of Rad53 phosphorylation, a commonly used indicator of checkpoint activation.

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Year:  2006        PMID: 16793397     DOI: 10.1016/S0076-6879(05)09006-3

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  6 in total

1.  RSC facilitates Rad59-dependent homologous recombination between sister chromatids by promoting cohesin loading at DNA double-strand breaks.

Authors:  Ji-Hyun Oum; Changhyun Seong; Youngho Kwon; Jae-Hoon Ji; Amy Sid; Sreejith Ramakrishnan; Grzegorz Ira; Anna Malkova; Patrick Sung; Sang Eun Lee; Eun Yong Shim
Journal:  Mol Cell Biol       Date:  2011-08-01       Impact factor: 4.272

2.  Phenotypes associated with Saccharomyces cerevisiae Hug1 protein, a putative negative regulator of dNTP Levels, reveal similarities and differences with sequence-related Dif1.

Authors:  Eunmi Kim; Wolfram Siede
Journal:  J Microbiol       Date:  2011-03-03       Impact factor: 3.422

3.  Mre11 nuclease and C-terminal tail-mediated DDR functions are required for initiating yeast telomere healing.

Authors:  M K Bhattacharyya; K M Matthews; A J Lustig
Journal:  Chromosoma       Date:  2008-03-12       Impact factor: 4.316

4.  Checkpoint kinase phosphorylation in response to endogenous oxidative DNA damage in repair-deficient stationary-phase Saccharomyces cerevisiae.

Authors:  Vaibhav Pawar; Liu Jingjing; Nila Patel; Nimrat Kaur; Paul W Doetsch; Gerald S Shadel; Hong Zhang; Wolfram Siede
Journal:  Mech Ageing Dev       Date:  2009-06-18       Impact factor: 5.432

5.  Chemical-genetic profiling of imidazo[1,2-a]pyridines and -pyrimidines reveals target pathways conserved between yeast and human cells.

Authors:  Lisa Yu; Andres Lopez; Abderrahmane Anaflous; Brahim El Bali; Abdellah Hamal; Elke Ericson; Lawrence E Heisler; Angus McQuibban; Guri Giaever; Corey Nislow; Charles Boone; Grant W Brown; Mohammed Bellaoui
Journal:  PLoS Genet       Date:  2008-11-28       Impact factor: 5.917

6.  Mutations in the Non-Catalytic Subunit Dpb2 of DNA Polymerase Epsilon Affect the Nrm1 Branch of the DNA Replication Checkpoint.

Authors:  Michał Dmowski; Justyna Rudzka; Judith L Campbell; Piotr Jonczyk; Iwona J Fijałkowska
Journal:  PLoS Genet       Date:  2017-01-20       Impact factor: 5.917

  6 in total

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