Literature DB >> 16790334

Arsukibacterium ikkense gen. nov., sp. nov, a novel alkaliphilic, enzyme-producing gamma-Proteobacterium isolated from a cold and alkaline environment in Greenland.

Mariane Schmidt1, Anders Priemé, Peter Stougaard.   

Abstract

A novel aerobic, Gram-negative, non-pigmented bacterium, GCM72(T), was isolated from the alkaline, low-saline ikaite columns in the Ikka Fjord, SW Greenland. Strain GCM72(T) is a motile, non-pigmented, amylase- and protease-producing, oxidase-positive, and catalase-negative bacterium, showing optimal growth at pH 9.2-10.0, at 15 degrees C, and at 3% (w/v) NaCl. Major fatty acids were C(12:0) 3-OH (12.2+/-0.1%), C(16:00) (18.0+/-0.1%), C(18:1)omega7c (10.7+/-0.5%), and summed feature 3 comprising C(16:1)omega7c and/or iso-C(15:0) 2-OH (36.3+/-0.7%). Phylogenetic analysis based on 16S rRNA gene sequences showed that isolate GCM72(T) was most closely related to Rheinheimera baltica and Alishewanella fetalis of the gamma-Proteobacteria with a 93% sequence similarity to both. The G+C content of DNA isolated from GCM72(T) was 49.9mol% and DNA-DNA hybridization between GCM72T and R. baltica was 9.5%. Fatty acid analysis and G+C content supports a relationship primarily to R. baltica, but several different features, such as a negative catalase-response and optimal growth at low temperature and high pH, together with the large phylogenetic distance and low DNA similarity to its closest relatives, lead us to propose a new genus, Arsukibacterium, gen. nov., with the new species Arsukibacterium ikkense sp. nov. (type strain is GCM72(T)).

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Year:  2006        PMID: 16790334     DOI: 10.1016/j.syapm.2006.05.003

Source DB:  PubMed          Journal:  Syst Appl Microbiol        ISSN: 0723-2020            Impact factor:   4.022


  5 in total

1.  Cold active pectinase, amylase and protease production by yeast isolates obtained from environmental samples.

Authors:  Ceren Daskaya-Dikmen; Funda Karbancioglu-Guler; Beraat Ozcelik
Journal:  Extremophiles       Date:  2018-03-07       Impact factor: 2.395

2.  Draft genome sequences of two protease-producing strains of arsukibacterium, isolated from two cold and alkaline environments.

Authors:  Jeanette E Lylloff; Lea B S Hansen; Morten Jepsen; Peter F Hallin; Søren J Sørensen; Peter Stougaard; Mikkel A Glaring
Journal:  Genome Announc       Date:  2015-06-04

3.  In situ Dynamics of O2, pH, Light, and Photosynthesis in Ikaite Tufa Columns (Ikka Fjord, Greenland)-A Unique Microbial Habitat.

Authors:  Erik C L Trampe; Jens E N Larsen; Mikkel A Glaring; Peter Stougaard; Michael Kühl
Journal:  Front Microbiol       Date:  2016-05-19       Impact factor: 5.640

4.  Discovery of novel enzymes with industrial potential from a cold and alkaline environment by a combination of functional metagenomics and culturing.

Authors:  Jan Kjølhede Vester; Mikkel Andreas Glaring; Peter Stougaard
Journal:  Microb Cell Fact       Date:  2014-05-20       Impact factor: 5.328

5.  Genomic and exoproteomic analyses of cold- and alkaline-adapted bacteria reveal an abundance of secreted subtilisin-like proteases.

Authors:  Jeanette E Lylloff; Lea B S Hansen; Morten Jepsen; Kristian W Sanggaard; Jan K Vester; Jan J Enghild; Søren J Sørensen; Peter Stougaard; Mikkel A Glaring
Journal:  Microb Biotechnol       Date:  2016-02-01       Impact factor: 5.813

  5 in total

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