Literature DB >> 16789884

A new nucleotide-composition based fingerprint of SARS-CoV with visualization analysis.

Meng Wang1, Jin-Song Yao, Zhen-De Huang, Zhi-Jie Xu, Guo-Ping Liu, Hai-Yong Zhao, Xue-Yong Wang, Jie Yang, Yi-Sheng Zhu, Kuo-Chen Chou.   

Abstract

It has been observed by conducting an extensive analysis of the two-dimensional cellular automata images of known SARS-CoV genome sequences that the V-shaped cross-lines only exist in some special locations, and hence can be used as a fingerprint to identify the SARS sequences. Such a discovery can be used to rapidly and reliably diagnose SARS coronavirus for both basic research in laboratories and practical application in clinics.

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Year:  2005        PMID： 16789884     DOI： 10.2174/1573406053402505

Source DB:  PubMed          Journal:  Med Chem        ISSN： 1573-4064            Impact factor:   2.745


  21 in total

1.  Multi-layered network structure of amino acid (AA) metabolism characterized by each essential AA-deficient condition.

Authors:  N Shikata; Y Maki; Y Noguchi; M Mori; T Hanai; M Takahashi; M Okamoto
Journal:  Amino Acids       Date:  2006-10-13       Impact factor: 3.520

2.  A novel fingerprint map for detecting SARS-CoV.

Authors:  Lei Gao; Yong-Sheng Ding; Hua Dai; Shi-Huang Shao; Zhen-De Huang; Kuo-Chen Chou
Journal:  J Pharm Biomed Anal       Date:  2005-11-14       Impact factor: 3.935

3.  The community structure of human cellular signaling network.

Authors:  Yuanbo Diao; Menglong Li; Zinan Feng; Jiajian Yin; Yi Pan
Journal:  J Theor Biol       Date:  2007-04-12       Impact factor: 2.691

4.  Donut-shaped fingerprint in homologous polypeptide relationships--a topological feature related to pathogenic structural changes in conformational disease.

Authors:  Xin Liu; Ya-Pu Zhao
Journal:  J Theor Biol       Date:  2009-02-25       Impact factor: 2.691

5.  TN curve: a novel 3D graphical representation of DNA sequence based on trinucleotides and its applications.

Authors:  Jia-Feng Yu; Xiao Sun; Ji-Hua Wang
Journal:  J Theor Biol       Date:  2009-08-11       Impact factor: 2.691

6.  Scoring function for DNA-drug docking of anticancer and antiparasitic compounds based on spectral moments of 2D lattice graphs for molecular dynamics trajectories.

Authors:  Lázaro G Pérez-Montoto; Lourdes Santana; Humberto González-Díaz
Journal:  Eur J Med Chem       Date:  2009-06-17       Impact factor: 6.514

7.  Alignment-free prediction of mycobacterial DNA promoters based on pseudo-folding lattice network or star-graph topological indices.

Authors:  Alcides Perez-Bello; Cristian Robert Munteanu; Florencio M Ubeira; Alexandre Lopes De Magalhães; Eugenio Uriarte; Humberto González-Díaz
Journal:  J Theor Biol       Date:  2008-10-17       Impact factor: 2.691

8.  Classification analysis of dual nucleotides using dimension reduction.

Authors:  Zhao-Hui Qi; Jian-Min Wang; Xiao-Qin Qi
Journal:  J Theor Biol       Date:  2009-05-27       Impact factor: 2.691

9.  A mathematical model of P53 gene regulatory networks under radiotherapy.

Authors:  J P Qi; S H Shao; Jinli Xie; Y Zhu
Journal:  Biosystems       Date:  2007-03-06       Impact factor: 1.973

10.  Dynamic modeling of cellular response to DNA damage based on p53 stress response networks.

Authors:  Jinpeng Qi; Yongsheng Ding; Shihuang Shao
Journal:        Date:  2009-08-05
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