Literature DB >> 16780898

A novel Lie algebra of the genetic code over the Galois field of four DNA bases.

Robersy Sánchez1, Ricardo Grau, Eberto Morgado.   

Abstract

Starting from the four DNA bases order in the Boolean lattice, a novel Lie Algebra of the genetic code is proposed. Here, the main partitions of the genetic code table were obtained as equivalent classes of quotient spaces of the genetic code vector space over the Galois field of the four DNA bases. The new algebraic structure shows strong connections among algebraic relationships, codon assignments and physicochemical properties of amino acids. Moreover, a distance defined between codons expresses a physicochemical meaning. It was also noticed that the distance between wild type and mutant codons tends to be small in mutational variants of four genes: human phenylalanine hydroxylase, human beta-globin, HIV-1 protease and HIV-1 reverse transcriptase. These results strongly suggest that deterministic rules in genetic code origin must be involved.

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Year:  2006        PMID: 16780898     DOI: 10.1016/j.mbs.2006.03.017

Source DB:  PubMed          Journal:  Math Biosci        ISSN: 0025-5564            Impact factor:   2.144


  4 in total

1.  Three-Dimensional Algebraic Models of the tRNA Code and 12 Graphs for Representing the Amino Acids.

Authors:  Marco V José; Eberto R Morgado; Romeu Cardoso Guimarães; Gabriel S Zamudio; Sávio Torres de Farías; Juan R Bobadilla; Daniela Sosa
Journal:  Life (Basel)       Date:  2014-08-11

2.  A group matrix representation relevant to scales of measurement of clinical disease states via stratified vectors.

Authors:  Jitsuki Sawamura; Shigeru Morishita; Jun Ishigooka
Journal:  Theor Biol Med Model       Date:  2016-02-09       Impact factor: 2.432

3.  A unified model of the standard genetic code.

Authors:  Marco V José; Gabriel S Zamudio; Eberto R Morgado
Journal:  R Soc Open Sci       Date:  2017-03-01       Impact factor: 2.963

4.  A symmetry model for genetic coding via a wallpaper group composed of the traditional four bases and an imaginary base E: towards category theory-like systematization of molecular/genetic biology.

Authors:  Jitsuki Sawamura; Shigeru Morishita; Jun Ishigooka
Journal:  Theor Biol Med Model       Date:  2014-05-07       Impact factor: 2.432

  4 in total

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