Literature DB >> 16780417

Structural variation of the human genome.

Andrew J Sharp1, Ze Cheng, Evan E Eichler.   

Abstract

There is growing appreciation that the human genome contains significant numbers of structural rearrangements, such as insertions, deletions, inversions, and large tandem repeats. Recent studies have defined approximately 5% of the human genome as structurally variant in the normal population, involving more than 800 independent genes. We present a detailed review of the various structural rearrangements identified to date in humans, with particular reference to their influence on human phenotypic variation. Our current knowledge of the extent of human structural variation shows that the human genome is a highly dynamic structure that shows significant large-scale variation from the currently published genome reference sequence.

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Year:  2006        PMID: 16780417     DOI: 10.1146/annurev.genom.7.080505.115618

Source DB:  PubMed          Journal:  Annu Rev Genomics Hum Genet        ISSN: 1527-8204            Impact factor:   8.929


  110 in total

1.  Rare CNVs and tag SNPs at 15q11.2 are associated with schizophrenia in the Han Chinese population.

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2.  Resolving the breakpoints of the 17q21.31 microdeletion syndrome with next-generation sequencing.

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Journal:  Am J Hum Genet       Date:  2012-04-06       Impact factor: 11.025

Review 3.  Genomic copy number variation in disorders of cognitive development.

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Journal:  J Am Acad Child Adolesc Psychiatry       Date:  2010-11       Impact factor: 8.829

4.  Double, Double Toil and Trouble.

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5.  BreakDancer: Identification of Genomic Structural Variation from Paired-End Read Mapping.

Authors:  Xian Fan; Travis E Abbott; David Larson; Ken Chen
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6.  Recurrent DNA inversion rearrangements in the human genome.

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Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-26       Impact factor: 11.205

7.  Molecular characterization of a polymorphic 3-Mb deletion at chromosome Yp11.2 containing the AMELY locus in Singapore and Malaysia populations.

Authors:  Rita Y Y Yong; Linda S H Gan; Yuet Meng Chang; Eric P H Yap
Journal:  Hum Genet       Date:  2007-06-23       Impact factor: 4.132

8.  Advances in translational bioinformatics: computational approaches for the hunting of disease genes.

Authors:  Maricel G Kann
Journal:  Brief Bioinform       Date:  2009-12-10       Impact factor: 11.622

9.  Combined immunodeficiency associated with DOCK8 mutations.

Authors:  Qian Zhang; Jeremiah C Davis; Ian T Lamborn; Alexandra F Freeman; Huie Jing; Amanda J Favreau; Helen F Matthews; Joie Davis; Maria L Turner; Gulbu Uzel; Steven M Holland; Helen C Su
Journal:  N Engl J Med       Date:  2009-09-23       Impact factor: 91.245

10.  Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes.

Authors:  Fereydoun Hormozdiari; Can Alkan; Evan E Eichler; S Cenk Sahinalp
Journal:  Genome Res       Date:  2009-05-15       Impact factor: 9.043

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