Literature DB >> 16777602

In vitro reconstitution of eukaryotic translation reveals cooperativity between release factors eRF1 and eRF3.

Elena Z Alkalaeva1, Andrey V Pisarev, Lyudmila Y Frolova, Lev L Kisselev, Tatyana V Pestova.   

Abstract

Eukaryotic translation termination is triggered by peptide release factors eRF1 and eRF3. Whereas eRF1 recognizes all three termination codons and induces hydrolysis of peptidyl tRNA, eRF3's function remains obscure. Here, we reconstituted all steps of eukaryotic translation in vitro using purified ribosomal subunits; initiation, elongation, and termination factors; and aminoacyl tRNAs. This allowed us to investigate termination using pretermination complexes assembled on mRNA encoding a tetrapeptide and to propose a model for translation termination that accounts for the cooperative action of eRF1 and eRF3 in ensuring fast release of nascent polypeptide. In this model, binding of eRF1, eRF3, and GTP to pretermination complexes first induces a structural rearrangement that is manifested as a 2 nucleotide forward shift of the toeprint attributed to pretermination complexes that leads to GTP hydrolysis followed by rapid hydrolysis of peptidyl tRNA. Cooperativity between eRF1 and eRF3 required the eRF3 binding C-terminal domain of eRF1.

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Year:  2006        PMID: 16777602     DOI: 10.1016/j.cell.2006.04.035

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  132 in total

1.  Identification of eRF1 residues that play critical and complementary roles in stop codon recognition.

Authors:  Sara E Conard; Jessica Buckley; Mai Dang; Gregory J Bedwell; Richard L Carter; Mohamed Khass; David M Bedwell
Journal:  RNA       Date:  2012-04-27       Impact factor: 4.942

2.  Three distinct peptides from the N domain of translation termination factor eRF1 surround stop codon in the ribosome.

Authors:  Konstantin N Bulygin; Yulia S Khairulina; Petr M Kolosov; Aliya G Ven'yaminova; Dmitri M Graifer; Yuri N Vorobjev; Ludmila Yu Frolova; Lev L Kisselev; Galina G Karpova
Journal:  RNA       Date:  2010-08-05       Impact factor: 4.942

3.  Dissection of Dom34-Hbs1 reveals independent functions in two RNA quality control pathways.

Authors:  Antonia M G van den Elzen; Julien Henri; Noureddine Lazar; María Eugenia Gas; Dominique Durand; François Lacroute; Magali Nicaise; Herman van Tilbeurgh; Bertrand Séraphin; Marc Graille
Journal:  Nat Struct Mol Biol       Date:  2010-11-21       Impact factor: 15.369

Review 4.  Nonsense-mediated mRNA decay: The challenge of telling right from wrong in a complex transcriptome.

Authors:  Aparna Kishor; Sarah E Fritz; J Robert Hogg
Journal:  Wiley Interdiscip Rev RNA       Date:  2019-05-26       Impact factor: 9.957

5.  Different modes of stop codon restriction by the Stylonychia and Paramecium eRF1 translation termination factors.

Authors:  Sergey Lekomtsev; Petr Kolosov; Laure Bidou; Ludmila Frolova; Jean-Pierre Rousset; Lev Kisselev
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-15       Impact factor: 11.205

6.  eIF2-dependent and eIF2-independent modes of initiation on the CSFV IRES: a common role of domain II.

Authors:  Tatyana V Pestova; Sylvain de Breyne; Andrey V Pisarev; Irina S Abaeva; Christopher U T Hellen
Journal:  EMBO J       Date:  2008-03-13       Impact factor: 11.598

Review 7.  Therapeutics based on stop codon readthrough.

Authors:  Kim M Keeling; Xiaojiao Xue; Gwen Gunn; David M Bedwell
Journal:  Annu Rev Genomics Hum Genet       Date:  2014-04-18       Impact factor: 8.929

8.  Cryo-EM structure of the mammalian eukaryotic release factor eRF1-eRF3-associated termination complex.

Authors:  Derek Taylor; Anett Unbehaun; Wen Li; Sanchaita Das; Jianlin Lei; Hstau Y Liao; Robert A Grassucci; Tatyana V Pestova; Joachim Frank
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-22       Impact factor: 11.205

Review 9.  Ribosome-based quality control of mRNA and nascent peptides.

Authors:  Carrie L Simms; Erica N Thomas; Hani S Zaher
Journal:  Wiley Interdiscip Rev RNA       Date:  2016-05-18       Impact factor: 9.957

10.  Poly(A)-Binding Protein Regulates the Efficiency of Translation Termination.

Authors:  Chan Wu; Bijoyita Roy; Feng He; Kevin Yan; Allan Jacobson
Journal:  Cell Rep       Date:  2020-11-17       Impact factor: 9.423

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