Literature DB >> 16774322

Approaches for the calculation of vibrational frequencies in liquids: comparison to benchmarks for azide/water clusters.

Shuzhou Li1, J R Schmidt, S A Corcelli, C P Lawrence, J L Skinner.   

Abstract

Ultrafast vibrational spectroscopy experiments, together with molecular-level theoretical interpretation, can provide important information about the structure and dynamics of complex condensed phase systems, including liquids. The theoretical challenge is to calculate the instantaneous vibrational frequencies of a molecule in contact with a molecular environment, accurately and quickly, and to this end a number of different methods have been developed. In this paper we critically analyze these different methods by comparing their results to accurate benchmark calculations on azide/water clusters. We also propose an optimized quantum mechanics/molecular mechanics method, which for this problem is superior to the other methods.

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Year:  2006        PMID: 16774322     DOI: 10.1063/1.2200690

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  6 in total

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Journal:  Chem Rev       Date:  2020-06-29       Impact factor: 60.622

2.  Fast enzyme dynamics at the active site of formate dehydrogenase.

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3.  Observation of a Zundel-like transition state during proton transfer in aqueous hydroxide solutions.

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Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-31       Impact factor: 11.205

4.  Calculation of vibrational shifts of nitrile probes in the active site of ketosteroid isomerase upon ligand binding.

Authors:  Joshua P Layfield; Sharon Hammes-Schiffer
Journal:  J Am Chem Soc       Date:  2012-12-31       Impact factor: 15.419

5.  Non-linear infrared spectroscopy of the water bending mode: direct experimental evidence of hydration shell reorganization?

Authors:  Lev Chuntonov; Revati Kumar; Daniel G Kuroda
Journal:  Phys Chem Chem Phys       Date:  2014-07-14       Impact factor: 3.676

6.  Sub-optical-cycle light-matter energy transfer in molecular vibrational spectroscopy.

Authors:  Martin T Peschel; Maximilian Högner; Theresa Buberl; Daniel Keefer; Regina de Vivie-Riedle; Ioachim Pupeza
Journal:  Nat Commun       Date:  2022-10-06       Impact factor: 17.694

  6 in total

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