Literature DB >> 16772380

Spatiotemporal reaction kinetics of an ultrafast photoreaction pathway visualized by time-resolved liquid x-ray diffraction.

Tae Kyu Kim1, Maciej Lorenc, Jae Hyuk Lee, Manuela Lo Russo, Joonghan Kim, Marco Cammarata, Qingyu Kong, Sylvie Noel, Anton Plech, Michael Wulff, Hyotcherl Ihee.   

Abstract

We have studied the reaction dynamics for HgI(2) in methanol by using time-resolved x-ray diffraction (TRXD). Although numerous time-resolved spectroscopic studies have provided ample information about the early dynamics of HgI(2), a comprehensive reaction mechanism in the solution phase spanning from picoseconds up to microseconds has been lacking. Here we show that TRXD can provide this information directly and quantitatively. Picosecond optical pulses triggered the dissociation of HgI(2), and 100-ps-long x-ray pulses from a synchrotron probed the evolving structures over a wide temporal range. To theoretically explain the diffracted intensities, the structural signal from the solute, the local structure around the solute, and the hydrodynamics of bulk solvents were considered in the analysis. The results in this work demonstrate that the determination of transient states in solution is strongly correlated with solvent energetics, and TRXD can be used as an ultrafast calorimeter. It also is shown that a manifold of structural channels can be resolved at the same time if the measurements are accurate enough and that global analysis is applied. The rate coefficients for the reactions were obtained by fitting our model against the experimental data in one global fit including all q-values and time delays. The comparison between all putative reaction channels confirms that two-body dissociation is the dominant dissociation pathway. After this primary bond breakage, two parallel channels proceed. Transient HgI associates nongeminately with an iodine atom to form HgI(2), and I(2) is formed by nongeminate association of two iodine atoms.

Entities:  

Year:  2006        PMID: 16772380      PMCID: PMC1478163          DOI: 10.1073/pnas.0601958103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  13 in total

1.  Time-resolved X-Ray diffraction from coherent phonons during a laser-induced phase transition

Authors: 
Journal:  Phys Rev Lett       Date:  2000-01-03       Impact factor: 9.161

2.  An atomic-level view of melting using femtosecond electron diffraction.

Authors:  Bradley J Siwick; Jason R Dwyer; Robert E Jordan; R J Dwayne Miller
Journal:  Science       Date:  2003-11-21       Impact factor: 47.728

3.  The realization of sub-nanosecond pump and probe experiments at the ESRF. European Synchrotron Radiation Facility.

Authors:  Michael Wullf; Anton Plech; Laurent Eybert; Rudolf Randler; Friedrich Schotte; Philip Anfinrud
Journal:  Faraday Discuss       Date:  2003       Impact factor: 4.008

4.  Structures of bromoalkanes' photodissociation in solution by means of ultrafast extended x-ray absorption fine-structure spectroscopy.

Authors:  D A Oulianov; I V Tomov; A S Dvornikov; P M Rentzepis
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-18       Impact factor: 11.205

Review 5.  Ultrafast X-ray absorption spectroscopy.

Authors:  Christian Bressler; Majed Chergui
Journal:  Chem Rev       Date:  2004-04       Impact factor: 60.622

6.  Visualizing chemical reactions in solution by picosecond x-ray diffraction.

Authors:  Anton Plech; Michael Wulff; Savo Bratos; Fabien Mirloup; Rodolphe Vuilleumier; Friedrich Schotte; Philip A Anfinrud
Journal:  Phys Rev Lett       Date:  2004-03-26       Impact factor: 9.161

Review 7.  Probing transient molecular structures in photochemical processes using laser-initiated time-resolved X-ray absorption spectroscopy.

Authors:  Lin X Chen
Journal:  Annu Rev Phys Chem       Date:  2005       Impact factor: 12.703

8.  Recombination of photodissociated iodine: a time-resolved x-ray-diffraction study.

Authors:  M Wulff; S Bratos; A Plech; R Vuilleumier; F Mirloup; M Lorenc; Q Kong; H Ihee
Journal:  J Chem Phys       Date:  2006-01-21       Impact factor: 3.488

9.  Impulsive solvent heating probed by picosecond x-ray diffraction.

Authors:  M Cammarata; M Lorenc; T K Kim; J H Lee; Q Y Kong; E Pontecorvo; M Lo Russo; G Schiró; A Cupane; M Wulff; H Ihee
Journal:  J Chem Phys       Date:  2006-03-28       Impact factor: 3.488

10.  Watching a protein as it functions with 150-ps time-resolved x-ray crystallography.

Authors:  Friedrich Schotte; Manho Lim; Timothy A Jackson; Aleksandr V Smirnov; Jayashree Soman; John S Olson; George N Phillips; Michael Wulff; Philip A Anfinrud
Journal:  Science       Date:  2003-06-20       Impact factor: 47.728

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  9 in total

1.  Photochemical tools to study dynamic biological processes.

Authors:  Alexandre Specht; Frédéric Bolze; Ziad Omran; Jean-François Nicoud; Maurice Goeldner
Journal:  HFSP J       Date:  2009-05-22

2.  Integrating solvation shell structure in experimentally driven molecular dynamics using x-ray solution scattering data.

Authors:  Darren J Hsu; Denis Leshchev; Irina Kosheleva; Kevin L Kohlstedt; Lin X Chen
Journal:  J Chem Phys       Date:  2020-05-29       Impact factor: 3.488

3.  Anisotropic Picosecond X-ray Solution Scattering from Photo-selectively Aligned Protein Molecules.

Authors:  Jeongho Kim; Kyung Hwan Kim; Jong Goo Kim; Tae Wu Kim; Youngmin Kim; Hyotcherl Ihee
Journal:  J Phys Chem Lett       Date:  2011-02-02       Impact factor: 6.475

4.  Sub-100-ps structural dynamics of horse heart myoglobin probed by time-resolved X-ray solution scattering.

Authors:  Key Young Oang; Kyung Hwan Kim; Junbeom Jo; Youngmin Kim; Jong Goo Kim; Tae Wu Kim; Sunhong Jun; Jeongho Kim; Hyotcherl Ihee
Journal:  Chem Phys       Date:  2014-10-17       Impact factor: 2.348

Review 5.  Reaction dynamics studied via femtosecond X-ray liquidography at X-ray free-electron lasers.

Authors:  Eun Hyuk Choi; Yunbeom Lee; Jun Heo; Hyotcherl Ihee
Journal:  Chem Sci       Date:  2022-06-06       Impact factor: 9.969

6.  Direct Observation of Insulin Association Dynamics with Time-Resolved X-ray Scattering.

Authors:  Dolev Rimmerman; Denis Leshchev; Darren J Hsu; Jiyun Hong; Irina Kosheleva; Lin X Chen
Journal:  J Phys Chem Lett       Date:  2017-09-05       Impact factor: 6.475

7.  SVD-aided pseudo principal-component analysis: A new method to speed up and improve determination of the optimum kinetic model from time-resolved data.

Authors:  Key Young Oang; Cheolhee Yang; Srinivasan Muniyappan; Jeongho Kim; Hyotcherl Ihee
Journal:  Struct Dyn       Date:  2017-04-05       Impact factor: 2.920

8.  100 ps time-resolved solution scattering utilizing a wide-bandwidth X-ray beam from multilayer optics.

Authors:  K Ichiyanagi; T Sato; S Nozawa; K H Kim; J H Lee; J Choi; A Tomita; H Ichikawa; S Adachi; H Ihee; S Koshihara
Journal:  J Synchrotron Radiat       Date:  2009-03-20       Impact factor: 2.616

Review 9.  Topical Review: Molecular reaction and solvation visualized by time-resolved X-ray solution scattering: Structure, dynamics, and their solvent dependence.

Authors:  Kyung Hwan Kim; Jeongho Kim; Jae Hyuk Lee; Hyotcherl Ihee
Journal:  Struct Dyn       Date:  2014-02-11       Impact factor: 2.920

  9 in total

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