Literature DB >> 16771355

Ab initio molecular dynamics simulations of elimination reactions in water solution: exploring the borderline region between the E1cb and E2 reaction mechanisms.

Filippo De Angelis1, Francesco Tarantelli, Sergio Alunni.   

Abstract

We report a theoretical study, based on ab initio molecular dynamics simulations in water solution, of the mechanism of base-induced beta-elimination reactions in systems activated by the pyridyl ring, with halogen leaving groups. The systems investigated represent borderline cases, where it is uncertain whether the reaction proceeds via a carbanion intermediate (E1cb, A(xh)D(H) + D(N)) or via the concerted loss of a proton and the halide (E2, A(N)D(E)D(N)) upon base attack. Recent theoretical and experimental evidence points toward the lack of a net distinction between the E1cb and E2 reaction paths, which seem to merge smoothly into each other in these borderline cases (Alunni, S.; De Angelis, F.; Ottavi, L.; Papavasileiou, M.; Tarantelli, F. J. Am.Chem. Soc. 2005, 127, 15151-15160). In this study, we explore the dynamics on the potential energy surface for the reaction of 2-(2-fluoroethyl)-1-methyl pyridinium with OH- by means of Car-Parrinello simulations in water solution. Our results indicate that the reaction mechanism effectively evolves through the potential energy region of the carbanion: the carbon-fluoride bond breaks only after the carbon-hydrogen bond, confirming the conclusions of a recently reported study of the potential energy surface for this system.

Entities:  

Year:  2006        PMID: 16771355     DOI: 10.1021/jp061321l

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  2 in total

1.  Concerted or stepwise: how much do free-energy landscapes tell us about the mechanisms of elimination reactions?

Authors:  Fernanda Duarte; Scott Gronert; Shina Caroline Lynn Kamerlin
Journal:  J Org Chem       Date:  2014-01-24       Impact factor: 4.354

2.  A Unified Framework for Understanding Nucleophilicity and Protophilicity in the SN 2/E2 Competition.

Authors:  Pascal Vermeeren; Thomas Hansen; Paul Jansen; Marcel Swart; Trevor A Hamlin; F Matthias Bickelhaupt
Journal:  Chemistry       Date:  2020-10-22       Impact factor: 5.236

  2 in total

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